Pairwise Alignments

Query, 324 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

Subject, 303 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  173 bits (439), Expect = 4e-48
 Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 4/295 (1%)

Query: 1   MSYLDNIRTFVRVYELGSMSAAGRDLRVSPAVTSARISQLEEYLGVRLFQRTTRNLTATE 60
           M  L ++R F +V E GS   A   L +S AV +  I+ LE +LG RL  R+TR L+ TE
Sbjct: 1   MDRLQSMRVFAKVVEQGSFVRAAELLDISNAVATRFIADLEAHLGTRLLNRSTRRLSLTE 60

Query: 61  QGRAFYDGAVAVLDAVDVAEAKVMHLTDTPRGTLFVAAPLGLGRRLLAPQTPEFLATYPE 120
            G+A+ +    +L  VD AEA V   T  P GTL +    G G+  L      +   YPE
Sbjct: 61  AGQAYLERVRMILAEVDDAEALVSLETKRPAGTLAIYCNAGFGQSQLGEMLSAYSQAYPE 120

Query: 121 INLRLRLSDRAVDLTSEGLDLAFFLG-QPEDSNLRIRKIADCQRVLCAAPDYVARRGMPE 179
           + L + LS+R++DL  EG+D+ FF   Q  D+++ +R++   + +LC +P Y+AR+G PE
Sbjct: 121 VALDISLSERSIDLVEEGIDIGFFSSMQKFDASMIVRQLGVARVILCTSPAYIARQGAPE 180

Query: 180 DGAALLREDHDCLNLRYPGASEFQWLLQTSEGPRRFAVSGRYECDDGDVLTDWALAGEGV 239
               L R  H+CLN  +       W + T+ G     +  +   + G +L D ALAG G+
Sbjct: 181 QPEDLSR--HNCLNFSHE-YLRHHWHVNTNGGVLDVPIVSKVVSNSGVLLRDLALAGMGI 237

Query: 240 VLKPLFEVAEHLAAGRLVPVAEATPPVPVQLACLYTHRRHQDPKTRLFMEYMTAR 294
           VL+P + + + L +GRLV V        V ++ +Y  RR    K R F E+++AR
Sbjct: 238 VLRPSYSLGDDLRSGRLVQVLPGFDMGQVIMSMVYPSRRLLSAKVRSFAEFISAR 292