Pairwise Alignments

Query, 287 a.a., putative ABC transporter, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 288 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Pseudomonas fluorescens FW300-N1B4

 Score =  378 bits (970), Expect = e-110
 Identities = 182/286 (63%), Positives = 226/286 (79%), Gaps = 1/286 (0%)

Query: 2   KTENQKAWFFVLPVLLLVAFNALIPMMTVVNYSVQETFGDNVFFWQGLDWFQQILRSDRF 61
           K +N KAW+ VLPV LLVAF+A+IPMMTVVNYSVQ+ F  +  ++ G DW++Q+L   R 
Sbjct: 3   KVQNNKAWWLVLPVFLLVAFSAVIPMMTVVNYSVQDIFDQSSRYFVGADWYKQVLLDPRL 62

Query: 62  HAALGRQFMFTFLILIIEIPLGIAIALSMPRKGFWVPVCLVLMALPMLIPWNVVGAMWNI 121
           H +L RQF+++  +L+IEIPLGIAIAL+MP KG W  V L+++A+P+LIPWNVVG +W I
Sbjct: 63  HDSLLRQFIYSGCVLLIEIPLGIAIALTMPTKGRWSSVVLIVLAIPLLIPWNVVGTIWQI 122

Query: 122 FTLPDIGLLGYFLNHTLGINYDMTQDPIAAWVTIITMDVWHWTSLVVLLSYAGLVSIPDA 181
           F   DIGLLG  L   +G+NY+   + + AWVT++ MDVWHWTSLV LL ++GL +IPD 
Sbjct: 123 FGRADIGLLGASLK-AMGLNYNYASNTMDAWVTVLVMDVWHWTSLVALLCFSGLRAIPDV 181

Query: 182 YYQAAKIDGASNWAVFRFIQLPKMKTVLTIAILLRFMDSFNIYTEPFVLTGGGPGNSTTL 241
           YYQAA+ID AS WAVFR IQLPK+K+VL IA++LRFMDSF IYTEPFVLTGGGPGN+TT 
Sbjct: 182 YYQAARIDRASAWAVFRHIQLPKLKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNATTF 241

Query: 242 LSIDLVKIALGQFDLGPAAAMSLIYFAITLLVSWLFYTVMTKDDQN 287
           LS  L ++A+GQFDLGPAAA SL+YF I LLVSWLFYT MT  D N
Sbjct: 242 LSQTLTQMAVGQFDLGPAAAFSLVYFLIILLVSWLFYTAMTHSDAN 287