Pairwise Alignments

Query, 985 a.a., putative ABC transporter cyclic nucleotide-binding protein from Phaeobacter inhibens DSM 17395

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 86/419 (20%), Positives = 167/419 (39%), Gaps = 22/419 (5%)

Query: 38  LFGYELTQLHYLWLLCGGFLMAVLAHGLLKMRINTMKGILAERMLRRFRYRLISRVLRFP 97
           L G  L+ LH L L      +A  A+  L+   NT+ G LA ++      RL   ++  P
Sbjct: 196 LVGRSLSSLHVLALAMLALAIAEPAYSYLR---NTVFGHLASQVNAELSGRLYRHLVGLP 252

Query: 98  QPYFERVSQGELVSMITSESEPMGGLMGDAVSQ--PVLQAGQMLTILYFLFMQNVWFGLA 155
             YF++   G++++ +   ++    L G  +     ++     L +++       W  + 
Sbjct: 253 LTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIG 312

Query: 156 AVALIPLQGWLI--PMLQRQINLLNKKRIRQIRALASEIGESAAGASTLRLNGGWRYRMA 213
           ++ +  +  WLI  P++++++    +          + + E+  G  T++        + 
Sbjct: 313 SLVIYFVL-WLIAGPLIRKKV----ESEYESDANATTFLTEAVTGIETIKTTATEHRFLE 367

Query: 214 VITDRLGWLYDIRFEIYQKKFFMKFLNNFITQLTPFLFYAVGGYLVLEGKVSLGALVAAL 273
                L    +  F+  +           + +LT  L    G   VL+G+++ G LVA  
Sbjct: 368 QWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFN 427

Query: 274 AAYKDLASPWKELLAYYNQTQDMALRWDVILERFDPPGMVDEVLMTGAPDDLQRLRGDIV 333
                +  P   L   +   Q   +    + +  D P    +  +   P+    L G I 
Sbjct: 428 MLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPE----LDGGIE 483

Query: 334 VEGVNVR-DANGNLVLEDLNARFPAGKVIGVAAPSEEDRRALAGLLTRELLPSAGEVLID 392
              +  R   +   VL +L+ +   G+ IGV  PS   +  L  LL R  +P  G+VL+D
Sbjct: 484 FSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVD 543

Query: 393 GQNMRDIHQAVIAARIGHATSRPVLFQGSFGDNVMMPIRQRPLGAAQDLRRYDVAQRAG 451
           G ++       +   +       +LF GS  DN+ +    +P  + +++R    AQ AG
Sbjct: 544 GMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRL---CKPQASDEEIRH--AAQLAG 597