Pairwise Alignments

Query, 647 a.a., putative extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

Subject, 693 a.a., ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

 Score =  122 bits (305), Expect = 7e-32
 Identities = 137/616 (22%), Positives = 256/616 (41%), Gaps = 77/616 (12%)

Query: 43  EQEVKSGDLPPIAERLPEMPLVVNLEAKGRQPGIQGGTLNTMVTRSKD-----IRQMVVY 97
           E+ VK+G LPP+AERLP+ P+V          G+ G  +  ++    +       Q   +
Sbjct: 68  EKFVKAGKLPPVAERLPKEPMVFKAGNMPDGMGVYGDVMRHVIGGRPEGWNYSAGQTQGW 127

Query: 98  GYARLAGYD-------------ENYQLQPDILLDFE-VEDNRRFTLKLRPGHHWSNGDPF 143
           G   +  ++             ++ +  P++   ++  ED R+ T+ L  G  WS+GDPF
Sbjct: 128 GGIDIGMFECLTRTAPLFQVEADDMEPLPNLAKSWDWSEDGRKLTMHLIEGAKWSDGDPF 187

Query: 144 TSADFEYWWKDVANNLLLNP-TGAPDYLKVDGALPTVSFPDETTVIYEWAAPNPSFLHSL 202
            + D  ++W+D   +  ++P  GA      +G   T+   D+ TV + +    P   H  
Sbjct: 188 DADDVMFYWEDNVLDSSVSPLNGATPETFGEGT--TLKKIDQYTVEWTFKEAFPR-QHLF 244

Query: 203 AQASPPFIYRPSAYLKQFHADYADPEKLAEEVDYARVKSWAALHNKLDNMYKFDNHELPT 262
           A A   F   PS  LK  H  YA                    +N+  N +  +   LP 
Sbjct: 245 AMAYGTFCPGPSHILKTKHPKYA-----------------GTTYNEYKNGFPAEYMNLPV 287

Query: 263 LQPWINATSGKKIRHLFVRNPYYHRLDSNGVQLPYIDTVEMEIVAGGLVAAKTNAGEADL 322
           +  W+          +  RNPYY ++D  G QLPY++ +  ++        +  AG  D+
Sbjct: 288 MGAWVPVAYRPDDIIVLRRNPYYWKVDEAGNQLPYLNELHYKLSTWADRDVQAIAGSGDI 347

Query: 323 QARGLGFRDIPILRKGETDGANYKTYLWGNGTASQIAIYPNLNVNDGQW----------R 372
                    +  L++   + A  +           I    ++N +   W          R
Sbjct: 348 SNLEQPENFVESLKRAANESAPARLAF----GPRVIGYNMHMNFSGNGWGDPDERAKAVR 403

Query: 373 QVLRDTRVRRALSVAINRAGINKALY---FKLAKPGAMTVLEASPFFDPALREAWAQYDP 429
           ++ R+   R+A+++A++R  + +AL    F    PG ++    + F+D      +  +D 
Sbjct: 404 ELNRNLDFRKAVTMAVDRKKLGEALVKGPFTAIYPGGLS--SGTSFYD-RNSTIYYPHDL 460

Query: 430 ELANQLLDEAGLTERDGYGIRKLP----DGRPMELVVETAGERQEVENALQIISDDWRDV 485
           E A  LL++ GL + DG G    P     GR +E+V+    +     N  + +      +
Sbjct: 461 EGAKVLLEKVGLKDTDGNGFVNFPAGKLGGRDVEIVLLVNSDYSTDRNLAEGMVGQMEKL 520

Query: 486 GVKLVMRPLDRDILRNRVFSGTTMASVWFGWDNGLPQTYTSPAYLAPTDQVFLSWPKWGQ 545
           G+++V+  LD        ++G       F W      T    + +  T Q+  + P+   
Sbjct: 521 GLRVVLNALDGKQRDAANYAGR------FDWMIH-RNTAEFASVVQNTPQLAPTGPRTSW 573

Query: 546 YHQT--GGDVGEAPDLEPAQKLMALWHDWEAAKTDEERTRVWQEMLKIHADEVYAIGLVA 603
           +H+   GG+V   P     Q+L+ + + + A+  ++ERT + ++  K+    V  +GL  
Sbjct: 574 HHRAPEGGEVDVMPH---EQELVDIVNKFIASNDNDERTELMKQYQKVATTNVDTVGL-T 629

Query: 604 AAPQPVVVSNRLRNVP 619
             P  ++++ R  N+P
Sbjct: 630 EYPGALIINKRFSNIP 645