Pairwise Alignments

Query, 501 a.a., putative crotonobetaine/carnitine-CoA ligase from Phaeobacter inhibens DSM 17395

Subject, 578 a.a., AMP-binding family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (434), Expect = 5e-47
 Identities = 152/515 (29%), Positives = 225/515 (43%), Gaps = 71/515 (13%)

Query: 28  RWTYGDLARACNALMTHLADLGVGPGDRVMLLCENCCAAVAALFATSQLGAVAVPVNARM 87
           RW Y       +AL   L  LG+GPGDR+ +   N        FAT+++GA+ V +N   
Sbjct: 63  RWNYRQYLARIDALAAGLLKLGIGPGDRIGIWSPNNIEWCLTQFATAKIGAIMVCINPAY 122

Query: 88  RAPEVDRILAHAQPAAVL----------------------------LTAAASPDAAAHAS 119
           R  E+   L +    AV+                            L A A P+      
Sbjct: 123 RPEELQYALTNVGCRAVICADKFKSSNYLQMLYTLAPELKECAAGQLQAKALPELQ-FVI 181

Query: 120 RLGAQRVEG--DFGCLHVVSQDAGGKSCAQIPEGLAV-----LLYTTGTTGAPKGVMLSH 172
           R+GA++  G  +F  L V           +I  GL+      + +T+GTTG+PKG  LSH
Sbjct: 182 RMGAEKSPGMLNFDDLLVEVSADDKAMLERIANGLSPYDAINIQFTSGTTGSPKGATLSH 241

Query: 173 DNLKFGGGASARLRDMASEDVVYGVLPLSHVFGLASVLTASVMIGAEVRLETRFTAERFY 232
            N+   G   A       +D +   +PL H FG+       +  GA       F  + F 
Sbjct: 242 HNILNNGYLVAEAMKFTCDDKLCIPVPLYHCFGMVLGNLVCLAKGAAAV----FPGDSFD 297

Query: 233 QAL------RSGVTLVSGVPQMHALVMQYAKEQGLDHLGSPDLRY-VSSGAAPLDPDWKR 285
                    R   T + GVP M    +++ +    D      LR  V +GA   +   +R
Sbjct: 298 PLTTLEVVERERCTALHGVPTMFIAELEHPEFTRFD---LSSLRTGVMAGATCPEEVMRR 354

Query: 286 RAEAFYGVALQNGYGMTEATAGICATRNGLGDPDT-------SVGPPLPGVELRLDQSVP 338
             +  Y   +  GYG TE     C+  N + + D+       +VG  LP  E+++   V 
Sbjct: 355 VQQLMYMQEVLIGYGQTE-----CSPLNHITEIDSPVEKRVLTVGRALPHTEVKI---VD 406

Query: 339 GGGDGL-----GEICLRGGNVMLGYFANQEATQTVLDPAGWLRSGDIGRLDESGNLHIDG 393
             G+ L     GE+C RG  +M  Y+ + E T   +D  GWL SGDIG++DE G + I G
Sbjct: 407 EFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDREGWLHSGDIGQMDEQGYVQIVG 466

Query: 394 RAKELIIHGGFNVFPPEVEAALNAHPQVVQSAVVG-RPQGGDEQVVAFVEVAVGDEPKVS 452
           R K++II GG N++P E+E  L  H  V  +AV G       E+V A+++V  G   K  
Sbjct: 467 RIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKVRSGATIKEE 526

Query: 453 ELRAFVAEQLAGYKRPGLFILTEQLPAAPTGKILK 487
           ++R F+ E+ A +K P      +Q P   TGKI K
Sbjct: 527 DIRHFLTEKFAYFKVPRYIKFVDQYPMTVTGKIQK 561