Pairwise Alignments

Query, 587 a.a., putative type I secretion system ATPase from Phaeobacter inhibens DSM 17395

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (543), Expect = 2e-59
 Identities = 146/552 (26%), Positives = 272/552 (49%), Gaps = 10/552 (1%)

Query: 13  VITSIFVASIFVNLLVLTAPLYMLQLFARVMASGSMPTLIALTTGAAIALVFFFLFDVIR 72
           +   + +AS+ +NL  + AP++   ++ +V+ + +  TL  L++G  +  +F F+F ++R
Sbjct: 153 IYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLR 212

Query: 73  QRLVARLGSR----LEARLSPVVLQGMISGNLPAPLRTAEPIRDIQDLRGFVTSPVFIAL 128
              +   G +    + ++L   V+   +    P+    A  +++ + +R F TS    +L
Sbjct: 213 SYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFARHLQEFESIREFFTSATISSL 272

Query: 129 LDAPWSLLFIALIFVFSPILGLVSVAGLLILLGLGVLSELMGRGPGKTSEEAARETNAAV 188
           +D P++LLF+ LI++ +  L  V V G+LIL+    L +   +   +     A +  A +
Sbjct: 273 IDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANL 332

Query: 189 DEMMVNAEIIHAMGKTSAQIGRWRGRAFTAILFGTLVTDRVA-LMTSLAKAVRMGLQIAV 247
            E +   E +   G       RW   A   +    + + R+   + + A  V+    I +
Sbjct: 333 IESLAGLETVKLFGAQGQFQYRWE-EAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGM 391

Query: 248 LGVGVVLVINNQLTPGLMIASSILLGRAAAPVEQSIAGWRALLKARSAKERLNLLLAHAE 307
           + VGV L+ N  LT G +IA+++L GRA  P+ Q         +A+S+   +  +++  +
Sbjct: 392 IIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPD 451

Query: 308 DTSDR---MELPDPTGRLSVENATVVLPGRQDPLLLDITLSLQPGHALGLIGPSGAGKTT 364
           +  +    +  P   G++ ++  T   P      + D++L++ PG  + +IG  G+GKTT
Sbjct: 452 EQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTT 511

Query: 365 LARALVGLQPLVRGHVRIDDAALTDWDPEQIGRHIGFLPQQVDLFRGSVAENIAMMDPTS 424
           L R ++GL     GHVRIDD  ++      I R+IG +PQ   LF GS+ +NI +  P S
Sbjct: 512 LERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLS 571

Query: 425 KPSDVVAAAKLARVHELILTLPGGYNAEVGPRGSFLSAGQRQRIGLARAFFGERKLIVLD 484
              +V+ AA  A V       P G   +VG  G  LS GQRQ + +ARAF G   ++++D
Sbjct: 572 DDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMD 631

Query: 485 EPNANLDPEGEEALAAAIEEACARGAIVVVVTHRLNLLRRVSHAALIQEGRIARFGEARQ 544
           EP + +D   E  +   + +       ++++TH+ ++L  V    ++++G I   G   +
Sbjct: 632 EPTSAMDNRSEMHIKQQLSQ-LKPSETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHE 690

Query: 545 IIEAAAQPMSRA 556
           ++    Q   RA
Sbjct: 691 VLNDLRQGNVRA 702