Pairwise Alignments

Query, 468 a.a., putative secretion protein, HylD family from Phaeobacter inhibens DSM 17395

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 11/260 (4%)

Query: 121 LVWPAAPVTADDEAGTPSIEPVSVAVRLSQAAPVTRMLRAEGVSKPDRDATLRAEMSGHV 180
           L+  +A ++A +    P+I  V+ +V+  Q   +++ L   G  K ++   + AE++G V
Sbjct: 14  LLMNSAVLSAKEPNQPPAISVVTESVQSQQ---ISQSLSVVGKLKAEQSVDIAAEVAGKV 70

Query: 181 ASVAVAKGAQVEAGQLLASLQPAQRTASLARAEASLLRAERDHTRAAALHQRGSTTEQRL 240
             +AV    QV+ GQ+L  L   +  A+L  A+A L   +R  T    L +R + T   +
Sbjct: 71  DMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEI 130

Query: 241 SEAREALAVAKADLAAARQSLAETRITAPFAGHLEEFDLTPGAYVQEGAAVARVVALDPL 300
              R  + + +A L AA+ +LA+  ITAPF G +   D + G +V  G+ +  +  L  +
Sbjct: 131 DAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLM 190

Query: 301 RVSFQVPQHQRGALRAGAVAQVRFLDGDSAEGRLSFLGQSAQADTR----SFAAEVMLDN 356
           R+  Q+P+     L  G   Q        A   + F G     D+R    +    V +  
Sbjct: 191 RLDLQIPERYLPQLSKGMKVQ----GSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHF 246

Query: 357 PSPSHAPPIPAGISARIAVP 376
           P+P         +SARI  P
Sbjct: 247 PNPDQRLKPGMLMSARIHFP 266