Pairwise Alignments

Query, 468 a.a., putative secretion protein, HylD family from Phaeobacter inhibens DSM 17395

Subject, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (467), Expect = 4e-51
 Identities = 109/345 (31%), Positives = 188/345 (54%), Gaps = 9/345 (2%)

Query: 113 LVIWMAVGLVWPAAPVTADDEAGTPSIEPVSVAVRLSQAAPVTRMLRAEGVSKPDRDATL 172
           L +W+ +G      P TA +      +    V  +   A    +++   G + PDR A +
Sbjct: 30  LALWLGLGDSNAEEPQTAMEI----QVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKI 85

Query: 173 RAEMSGHVASVAVAKGAQVEAGQLLASLQPAQRTASLARAEASLLRAERDHTRAAALHQR 232
            AE++G +A V +AKG  V   Q++A +      A L RA+A L   +++   A+AL  +
Sbjct: 86  GAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNK 145

Query: 233 GSTTEQRLSEAREALAVAKADLAAARQSLAETRITAPFAGHLEEFDLTPGAYVQEGAAVA 292
           G   E   + A  AL  A++ L+  ++ L  T++ APF G +E   +  G +V  G  VA
Sbjct: 146 GLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVA 205

Query: 293 RVVALDPLRVSFQVPQHQRGALRAGAVAQVRFLDGDSAEGRLSFLGQSAQADTRSFAAEV 352
            ++ L  L +   V +     ++    A++RF+DG   +G++ ++ + +   T +FA EV
Sbjct: 206 SIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQTQGKVRYISRLSSPATNTFAIEV 265

Query: 353 MLDNPSPSHAPPIPAGISARIAVPLDIVQAHFLSPALLSLDMAGVLGIKSVDDADRVVFT 412
            +DNP  +    IPAG+SA + + L    A  ++PA+L+LD  G LG+K++   + V F 
Sbjct: 266 EVDNPQQA----IPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTL-QGEHVKFV 320

Query: 413 PVEIVQSERDGVWVSGLPDQLRLITVGQGFVTAGEVVRPREAAAT 457
           P+++V++E+DGVW++GL +Q+ +IT GQGFV  G+ V   + +AT
Sbjct: 321 PIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLATQLSAT 365