Pairwise Alignments

Query, 631 a.a., ABC transporter, transmembrane ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 610 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

 Score =  545 bits (1405), Expect = e-159
 Identities = 295/610 (48%), Positives = 408/610 (66%), Gaps = 10/610 (1%)

Query: 1   MFRAFENLVDPFA-ASQMAPPQAGL--WRYLMQQLVPYRKWLPLMLVTGVLTALMESGLI 57
           +FR FE L+D F  A   APP   L  + Y ++Q+ P      ++LV G++ AL+E  L 
Sbjct: 2   VFRRFETLIDIFRDAPSSAPPNRVLPFYTYYLKQVWPS---FAVLLVVGLIGALIEVALF 58

Query: 58  FYAGRLVDLMSASGAAAFWADHGGEMILALLCVLLLRPTLVGLNHLLLEQTLSSNLQEQV 117
            Y  R++DL   +    F+  HG E+    +  L+ RP  V L+ LL+ QTLS  +   +
Sbjct: 59  SYLSRIIDLTQGTPNVDFFKVHGLELAWMAVVALVFRPIFVALHDLLVHQTLSPGMTSLI 118

Query: 118 RWQAHRHLLGQSVGFFQHDFAGRLSNRVMQMGPAVQDSVHMMFEAVLFAGTYMLGAVVVL 177
           RWQ H ++L QS+ FFQ+DFAGR++ R+MQ G +++DS     +A+     Y + ++V+ 
Sbjct: 119 RWQNHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAISSLVLF 178

Query: 178 SQIDWRLAVPLLIWVVIYAIYVRHVARSVAATAEKWSDARSGATGRIVDAYGNIETVKLF 237
           ++ DWRL +PLL+W+  Y   + +    V   +   SDARS   GRIVD Y NI T+KLF
Sbjct: 179 AEADWRLMIPLLMWIAAYIGALCYFVPRVKERSVVSSDARSKLMGRIVDGYTNITTLKLF 238

Query: 238 AQGGQELGYALSALRRLRTRYQRFMRMMTTLAFGSIAINGVLILIVVAPAIWLWTLGQVS 297
           A    E  YA  A++    + Q   R++T++     ++NG+LI+     A+WLWT   +S
Sbjct: 239 AHTNFEQQYAREAIQEQTEKAQLAGRVVTSMDVVITSMNGLLIVGTTGLALWLWTQSLIS 298

Query: 298 VGEVAAVAALTIRLNGMSGWILWVTIRLFENMGVIREGLRSLATPHAITDAEDAAALHVS 357
           VG +A    L IR+  MSGWI+WV   +FEN+G++++GL+++A P ++TD + A  L V+
Sbjct: 299 VGAIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVSVTDRDQAKPLAVA 358

Query: 358 QAEIRVEGLHHSYGKASEDGSGGVAGLDLTIGAGQRIGIAGPSGAGKSTLVSLLLRFDDP 417
           + E+R E +   YGK S    G +  L+L I  G++IG+ GPSGAGKSTLV+LLLR  D 
Sbjct: 359 RGEVRFEHVDFHYGKKS----GVIGDLNLIIKPGEKIGLIGPSGAGKSTLVNLLLRLYDV 414

Query: 418 ERGRILIDGQPITGVTQDSLRGQIGVVTQNTALVHRSVRANILYGNPGASEAEMVMAAKR 477
           + GRILIDGQ I  V Q+SLR +IG++TQ+T+L+HRS+R N+LYG P A++A++  A ++
Sbjct: 415 QGGRILIDGQDIAEVGQESLRERIGMITQDTSLLHRSIRDNLLYGKPDATDAQLWEAVRK 474

Query: 478 ARAHDFILGLRDQAGRTGYDAHVGERGVALSGGQRQRIAIARVVLKNAPILILDEATSAL 537
           ARA +FI  L D  GRTG+DAHVGERGV LSGGQRQRIAIARV+LK+APILI+DEATSAL
Sbjct: 475 ARADEFIPLLSDAEGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSAL 534

Query: 538 DSAVEAEIQDTLMDVMQGKTVIAIAHRLSTIAQMDRVVVMDQGRITEDGSHAALLALGGT 597
           DS VEA IQ++L  +MQGKTVIAIAHRLSTIA+MDR+VV++ GRI E GSHA LLA GG 
Sbjct: 535 DSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLENGRIAETGSHAELLAHGGL 594

Query: 598 YAMLWSRQAG 607
           YA LW  Q G
Sbjct: 595 YARLWQHQTG 604