Pairwise Alignments

Query, 346 a.a., putative HTH-type transcriptional regulator from Phaeobacter inhibens DSM 17395

Subject, 371 a.a., LacI family DNA-binding transcriptional regulator from Bifidobacterium breve UCC2003

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 77/339 (22%), Positives = 136/339 (40%), Gaps = 33/339 (9%)

Query: 13  RDGKKPTLKTIAKASGMAVPTVSRALSDAPDISEATKKKVREIADALGYVPNRAGVRLRT 72
           +  K+P++  +AK +G++  TVSR ++D+PD+S+AT+ +V+   D LGY P+ +   L +
Sbjct: 6   KPNKRPSMFEVAKLAGVSHQTVSRVINDSPDVSDATRARVQAAIDELGYRPSNSARALAS 65

Query: 73  GRTNVISLVMSAEREMMTQTARLLTSLGLALRETHYHLNVSPVF------PDDDPLRAVR 126
            R+  I L+    +     +A  +TS+    RE    ++V  V        D D L    
Sbjct: 66  RRSRTIGLIAGGLKFFGLISA--ITSIESIAREHGLFMSVMMVHEALCTQSDFDNLCDT- 122

Query: 127 YIVENQTADCVIFNQVEPEDK------RAEYLIERNFPFATHGR-----------TKWAD 169
                Q  D  IF  + P D       RA     R    +THG+           T    
Sbjct: 123 --FNEQNVDAFIF--LTPTDVMFAAACRARVNQPRVIVTSTHGQMTVREGMSLISTANKR 178

Query: 170 QHPYYDFDNFAFSELSLAELAARGRRNIVLLAPPLAQNYANDMVNGARHAAKALGIQLHV 229
           +      D +      ++ L   G ++ +  A P     A+  ++  R  A A  I   +
Sbjct: 179 RTAMVGIDQWGAMAKVVSLLGEYGHKSALYFAGPNEWRDAHTRLDAWRKLAAARSIDSQI 238

Query: 230 AR--QVQSNGLYKDLRNWAAEKHRED-PTIDGFLCASTNATMSVVAGMESCGCTVGQEFD 286
            R     ++  Y  + +   E  R   P     + A+ N  + VV  +      + Q+  
Sbjct: 239 VRCHTWDADEAYAHMNHLLDEYGRTGVPLPTAVVAANDNQAVGVVRSLHEHSLRIPQDIS 298

Query: 287 VVAKEGLHMLKFVRPEIIVVQEDIEATGVFLAKAALQAI 325
           VV  + +  +  + P +  V  D E  GV   +  L+ +
Sbjct: 299 VVGFDDMAGMDNLYPPLTTVHPDFEGLGVAAMRETLRLL 337