Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 176 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 2/145 (1%)

Query: 29  LRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMFRVLRNLWVSEIRKRRV 88
           LR +AL+ T+   DA+DL+Q+    A+  + ++     L  W+F +++N +++  R R V
Sbjct: 17  LRSYALNFTKDAEDANDLVQDTMLKAITYYNKFKEGTNLKGWLFTIMKNTFINNYR-RLV 75

Query: 89  RQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDPALAQPLLLVCAEGYSY 148
           +    +   E+ +    S  +  + AE+      +   ++ +      P +    EGY Y
Sbjct: 76  KTNTLITQSEDISSANLSYSATKNQAESKFVLGDIDKALSQLPEEYYVPFIRY-FEGYKY 134

Query: 149 REVSELLDVPIGTVMSRIHRARKLL 173
            E++++L +PIGTV +RIH AR +L
Sbjct: 135 HEIADMLAIPIGTVKTRIHVARGIL 159