Pairwise Alignments

Query, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

Subject, 916 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

 Score =  303 bits (775), Expect = 3e-86
 Identities = 240/801 (29%), Positives = 382/801 (47%), Gaps = 69/801 (8%)

Query: 1   MKRTGILFQIVVSLSLAALLVAAAIGDVARRYETRNLQAQLKEQAELTISLLSGLMLESI 60
           +K+ GI  ++++   L   L+A  +G      +  +LQ QL ++ E+    L+ L+  ++
Sbjct: 2   LKKLGIKGRVLLLTLLPTSLMALVLGGYFTWMQQSDLQTQLLQRGEMIAEQLAPLVAPAM 61

Query: 61  IVEDVPVLETGLIEAIARNPKLLQIQIQNSAGTPIAEAGEIDQVGP-------------D 107
             ++  +LE    +++ + P +  +       T +A AG +    P             +
Sbjct: 62  GHKNDDLLERIATQSLEQ-PDVRAVSFLAPDRTQLAHAGPLMLNQPPTGESAHMLQRTGN 120

Query: 108 DFVMYDRPITLDGFDFGRMVVHWSTREGQAMVQHKVSQTIMW-----TVVAVAILSLLVL 162
           D   Y  P+     +    ++   +      V+ ++S   M      ++ A  +L    L
Sbjct: 121 DATRYLLPVFGRHRNLAGELIPDESDRLLGWVELELSHNGMLLRGYRSLFASVLLIAAGL 180

Query: 163 ILVSVLALR-------PLQIIHQRMSGAIAGLSGLQARLPWFASREFRALNFSVGVLEDT 215
           +  ++LALR       PL +I Q ++    G   L+ RLP   S+E   L   +  +  T
Sbjct: 181 VGTALLALRMGRTINTPLNLIKQAVAQLKEG--HLETRLPPLGSQELDELASGINRMAST 238

Query: 216 FSERDE----------------------REYALEEARKAADIANRAKSEFLANMSHEIRT 253
                E                      +   L+ ARK A  A+R KSEFLANMSHEIRT
Sbjct: 239 LQNAQEELQHSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRT 298

Query: 254 PMNGVIGMAELILETDLDEDQTMYAETISKSGSALLTIINDILNFSKIEAGKMELERAPF 313
           P+NG++G   L+ +++L   Q  Y  TI KS  +LL IIN+IL+FSKIEAGK+ L+  PF
Sbjct: 299 PLNGILGFTHLLQKSELTPRQLDYLGTIEKSADSLLGIINEILDFSKIEAGKLVLDSIPF 358

Query: 314 NLQTAIEDVVTLLSPKAAEKNVEVTLRYDPSLPECYEGDVGRIRQILTNVAGNAVKFTGK 373
           NL+  ++D +T+L+P A  K +E+        P    GD  R++QILTN+  NA+KFT +
Sbjct: 359 NLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLVGDPLRLKQILTNLVSNAIKFTRE 418

Query: 374 GYVYIEVSGETD-DDRTALRISVTDTGAGIPEDRLDRIFNAFEQADGAATRNYEGTGLGL 432
           G +      E + +D   LRIS+ DTG G+    +  +F AF QAD + +R   GTGLGL
Sbjct: 419 GTIVARAMLEEEHEDSVQLRISIQDTGIGLSNQDVRALFQAFSQADNSLSRQPGGTGLGL 478

Query: 433 AISTRLLELMGGRISVQSELGKGSVFAIDLPLRIRPSQPKRAQDARDFK-----GLRALV 487
            IS RL+E MGG I V S  G+GS F + L L      PK   DA D       G R  V
Sbjct: 479 VISKRLIEQMGGEIGVDSTPGEGSEFWVSLSL------PKTRDDAEDLPGPPLLGRRVAV 532

Query: 488 VDDLELNRIILTERLATWGVQSVAAGSAHQALELLLDSRHDGTHYDVILQDFQMPGMDGK 547
           +++ EL R  L  +L   G++     +       +  +       D+ +       M  +
Sbjct: 533 LENHELARQALQHQLEDCGLEVTPFNTLESLTNGVTGAHQTEQAIDLAVLGITSNDMPPE 592

Query: 548 ELAERIRDIPEYRDLPIVILSSVENTIDREAREHLGRCEVALKPLRAAQLQSVMSRVLET 607
            L + I D+       +V+  + E T+   +  +    ++  KP    +L+  +S ++  
Sbjct: 593 RLNQHIWDLEHLGCKVLVLCPTTEQTLFHLSVPN-PHSQLQAKPACTRKLRRALSDLVN- 650

Query: 608 ATEEAPQAVPPQGVETSVVPEVKLLLAEDNRTNQLVVSRMLKAAPIEVLIAANGEEAVTM 667
                P+ +  +  E       K+L  +DN  N L+V  +L+    +VL   +G  AV  
Sbjct: 651 -----PRQLRNEPGEPISSRAPKVLCVDDNPANLLLVQTLLEDMGAKVLAVESGYAAVKA 705

Query: 668 FQEHHPDIVLMDMMMPVKDGIDATAEIRQLEKDNGLGRCPVVALTANALQSHREECLAAG 727
            Q    D+VLMD+ MP  DG  +T  IRQ E +      P+VALTA+A+ + +   L +G
Sbjct: 706 VQTEAFDLVLMDVQMPGMDGRQSTEAIRQWESERHCTPLPIVALTAHAMANEKRALLQSG 765

Query: 728 MDDFLSKPINKKALLGAVGKW 748
           MDD+L+KPI+++ L   V KW
Sbjct: 766 MDDYLTKPISERQLAQVVLKW 786