Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 253 a.a., LuxR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 14/237 (5%)

Query: 5   VNLDLILEVLDATTSVDGLQEIIQRVCDTFDVDHAMYHWVDSAGDHYHFGTYSQGWVER- 63
           V+L  ++  L+ + S   +Q+I+++    +  D  ++    S  D      Y   W+E  
Sbjct: 18  VDLITLISQLEESHSFSTVQDIVRQRAHFYGYDKIVFFSAHSTLDGIIERIY---WIEGD 74

Query: 64  -YQEKAYVRVDPVIIGCYQRFHPVDWRR-LDWSSKP---AREFLQDALAHDVGNQGYSIP 118
            + +   +     I  C    H ++  R   W+ KP     ++   A     G  G  IP
Sbjct: 75  WFDDGENIDAATYIKYCPITRHIIETDRPFFWTKKPDVNREQYRVVAKPKGSGIHGLQIP 134

Query: 119 IRGPNGQFALFTVSHNCDDDTWTRFTDKHSRDLILIGHYFNRKALEFEPDRSPEHVQPLS 178
           I G  G     ++     D +      +   +L L+  Y    A        P     LS
Sbjct: 135 IFGHLGLEGAVSLGGKAIDSS-----PRARCELSLLSTYAFFAARRLLESSDPNRSALLS 189

Query: 179 PREIDALTLLAMGYSRAQVAKTLTISEHTLRVYIESARFKLGAINTTHAIARALSLG 235
            RE + L+L A+G  +A +A  L +S  T+  ++ +AR KLG   T   I  A+  G
Sbjct: 190 KREKEVLSLTALGRRQADIAIALGVSPRTIENHLRNARLKLGGATTAETIRIAIQRG 246