Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 236 a.a., transcriptional regulator, LuxR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  252 bits (643), Expect = 5e-72
 Identities = 126/233 (54%), Positives = 165/233 (70%), Gaps = 1/233 (0%)

Query: 7   LDLILEVLDATTSVDGLQEIIQRVCDTFDVDHAMYHWVDSAGDHYHFGTYSQGWVERYQE 66
           L+  LE L    S+D +Q  +  + ++ +V++  YH +D++G+ Y   TY   WV+RY E
Sbjct: 5   LESFLEDLQEAKSLDDVQARLFGLRESLEVENFAYHCLDASGNKYGAMTYDAPWVKRYIE 64

Query: 67  KAYVRVDPVIIGCYQRFHPVDWRRLDWSSKPAREFLQDALAHDVGNQGYSIPIRGPNGQF 126
             Y RVDPVI G YQRFHPVDW++LDWS K AREF+ +AL   VGNQG S+P+RGPNGQF
Sbjct: 65  MDYARVDPVIKGTYQRFHPVDWKQLDWSPKAAREFMGEALETGVGNQGLSVPVRGPNGQF 124

Query: 127 ALFTVSHNCDDDTWTRFTDKHSRDLILIGHYFNRKALEFEPDRSPEHVQPLSPREIDALT 186
           A+F+V++   D  W  +  ++ +  IL  H+ N++ALE E D +P   +PLSPRE DALT
Sbjct: 125 AVFSVNNRATDAAWESYQKEYLKTFILAAHFINQRALELEEDINPT-AKPLSPRESDALT 183

Query: 187 LLAMGYSRAQVAKTLTISEHTLRVYIESARFKLGAINTTHAIARALSLGLIII 239
            LA G SR QVA+ L ISEHTLRVYIESARFKLGA NTTHA+ARA+  GLI++
Sbjct: 184 HLANGLSRGQVAEKLKISEHTLRVYIESARFKLGAANTTHAVARAMVRGLIVV 236