Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 265 a.a., transcriptional regulator, LuxR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 39  AMYHWVDSAGDHYHFGTYS--QGWVERYQEKAYVRVDPVIIGCYQRFHPVDWRRLDWSSK 96
           AM   + SA   +H   +   + WV+ Y +     +DP+     +R  P  W  +   ++
Sbjct: 59  AMDDVIVSATPRFHIIAHGFPREWVDIYVDDHLYEIDPIPALAQRRAVPFLWSEVAELTR 118

Query: 97  PARE---FLQDALAHDVGNQGYSIPIRGPNGQFALFTVSHNCDDDTWTRFTDKHSRDLIL 153
            A E   FL+ ++   VG+ G +I + GPN +     +      D     T     +  L
Sbjct: 119 LAEEQAAFLERSMPARVGD-GVAIQVFGPNMRHGYVGMGFG---DRPRDVTAPQLAEYQL 174

Query: 154 IGHYFNRKALEFEPDRSPEHVQPLSPREIDALTLLAMGYSRAQVAKTLTISEHTLRVYIE 213
           +    + +A     +R+   +  LS RE + L  +A G S+  +A  L +S HT+   + 
Sbjct: 175 VSQLMHLRACRLIEERNRSEIA-LSARETEVLGWMARGKSKTVIADILGLSPHTVDTLVR 233

Query: 214 SARFKLGAINTTHAIARALSLGLI 237
               KL   + T AI +A++LGL+
Sbjct: 234 RIFRKLEVFDRTAAILKAINLGLV 257