Pairwise Alignments

Query, 341 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 335 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

 Score =  214 bits (544), Expect = 3e-60
 Identities = 115/304 (37%), Positives = 174/304 (57%), Gaps = 2/304 (0%)

Query: 40  SGLSQLANSKPAANRA-TQRVTLDQIVELYQIAAAETGDEMPGLWSRPVRPRALQHLLTT 98
           + L + A   PA   A T RVT +Q   LY++ A E  DE+PG++SRPVR  A + L  +
Sbjct: 29  TALVEQAGIAPALLAADTARVTTEQFATLYRLLARELDDELPGMFSRPVRAGAFKFLCLS 88

Query: 99  VREAGNLPAALYRFSTFWNLILDDYHIELKSEESCISLSLVPRG-AQETHRFGHMLLLKL 157
           + E+ NL  AL+RF+ F++L+LDD+ I+L  +   + ++L+P+  A   + FG  ++LKL
Sbjct: 89  LLESANLQTALFRFTRFFHLLLDDFAIDLSRQGGLVRIALIPQTPAAPANTFGQEIMLKL 148

Query: 158 AHGLLSWLAGYEVPVQAVQFAFDQPGFAQDYGVIFPAPVRFSQLCSAISFDPQQLGPPQP 217
            HG+ SWL G+++ +  V  A+ +P  A +Y  ++P PV F Q  SA+ F+   L  P  
Sbjct: 149 IHGVASWLTGHKMTLARVDCAYPRPRHASEYVFLYPGPVHFDQGQSALYFEASALATPIR 208

Query: 218 RSPAELAAFLDRAPRDWIFTGFREHRLSLQIRDFLYRSNWEDCRLGDAAAMLNVTPRTLM 277
           +    L  FL +AP  W+F  F E  +S ++R+ L +       +   A  L+ + R+L 
Sbjct: 209 QDKNSLGTFLSKAPGGWLFVSFAERLVSQKVRETLEKQLEHSLSIETVARSLHTSVRSLT 268

Query: 278 RRLEDEAASFQSIKDALRRDIAIRDLRAGHKSIEDISHDLGFSSSANFHRAFRRWTGGTT 337
           R L  E  +FQ+IKD LRRD+AI+ L      I  I   +GF     FHRAFR+WTG T 
Sbjct: 269 RHLATEGTTFQAIKDELRRDVAIQRLTQTDMPIAVIGTAVGFDDPTTFHRAFRKWTGSTP 328

Query: 338 SSYR 341
            +YR
Sbjct: 329 GAYR 332