Pairwise Alignments

Query, 341 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 342 a.a., transcriptional regulator, AraC family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  389 bits (998), Expect = e-113
 Identities = 194/333 (58%), Positives = 243/333 (72%), Gaps = 6/333 (1%)

Query: 9   LATVSLPFIEDWLSALQASCDVDQIHRILTHSGLSQLANSKPAANRATQRVTLDQIVELY 68
           L+TVS  FI DWL AL+  C VD    +L  + L    ++       T RVTLDQ+V LY
Sbjct: 9   LSTVSSQFIADWLQALRPLCSVDHFRSLLKRAALQDDCDAP------TGRVTLDQVVCLY 62

Query: 69  QIAAAETGDEMPGLWSRPVRPRALQHLLTTVREAGNLPAALYRFSTFWNLILDDYHIELK 128
           Q+AA ET DEM GLWSRP+R RALQHLLT++REA  L +ALYRFSTFWNL+LDDY     
Sbjct: 63  QLAAVETEDEMMGLWSRPIRQRALQHLLTSIREATTLSSALYRFSTFWNLLLDDYQFSFA 122

Query: 129 SEESCISLSLVPRGAQETHRFGHMLLLKLAHGLLSWLAGYEVPVQAVQFAFDQPGFAQDY 188
             ++   L LVP+  Q   RFGHML+LKLAHGL+SWLA YEVPV+AV FAF+ P F +DY
Sbjct: 123 EADNVSVLKLVPQTDQAAQRFGHMLILKLAHGLISWLARYEVPVKAVGFAFEAPAFEEDY 182

Query: 189 GVIFPAPVRFSQLCSAISFDPQQLGPPQPRSPAELAAFLDRAPRDWIFTGFREHRLSLQI 248
            VIFPAPVRF+Q  ++I+F P  LGP Q RS A+L  FL+ APRDWIFT  + H  SL++
Sbjct: 183 AVIFPAPVRFAQSATSIAFGPGVLGPVQVRSSADLTLFLENAPRDWIFTQSQVHTQSLRV 242

Query: 249 RDFLYRSNWEDCRLGDAAAMLNVTPRTLMRRLEDEAASFQSIKDALRRDIAIRDLRAGHK 308
           R +L ++ W+   L +AAA ++VTPRTL+R+LE +  SFQ+IKDALRRDIAIR L+ G  
Sbjct: 243 RTYLSQTGWDSANLTEAAAAMHVTPRTLIRKLEADGTSFQAIKDALRRDIAIRHLQTGQH 302

Query: 309 SIEDISHDLGFSSSANFHRAFRRWTGGTTSSYR 341
           S+E I+H++GFSS+ANFH+AF+RWTG T SSYR
Sbjct: 303 SVEAIAHEVGFSSAANFHKAFQRWTGNTPSSYR 335