Pairwise Alignments

Query, 313 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (359), Expect = 8e-39
 Identities = 101/300 (33%), Positives = 146/300 (48%), Gaps = 10/300 (3%)

Query: 13  MSRRHYDLPPLTTLAAFETAARHLSFKNAAQELSVTPGAVSHQIKALEGELGVALFQRKH 72
           MSRR   LPPL +L  FE AARHLSF  AA+EL VT  AVSHQIKALE  LG+ LF+R++
Sbjct: 1   MSRR---LPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRN 57

Query: 73  RGVELTREGQGLYESLATSFRQISRQLSKTRQMGEEDAVTVGSTTAVAALWLSPMIIQFW 132
           R + LT EGQ  +  +   F  ++    K  +  E+ A+T+    + A  WL P +  F 
Sbjct: 58  RSLLLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFN 117

Query: 133 REYPDLNIHQITQDRPFHD-TREFDFFIRYGRDRDAALAHTAIYRDQLVPVARPDLAAG- 190
           ++ PD+++     D      T + D  I YGR     L    +Y++ L+P+  P L  G 
Sbjct: 118 QQEPDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGN 177

Query: 191 LDGASLQEIAQQRLIHLQSASQSWTTWADWFHELG-HKGDIAAGTRVTSYSVALQIARKG 249
                L ++A   L+H      S   W  +  E G    ++  G   +  ++ LQ A  G
Sbjct: 178 KPMEKLSDLAYHTLLH----DTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHG 233

Query: 250 AGVALGWRRLIQPMLDSGKLAIVGCHSVPAPREFYLVGLPDDELSPNALKLKQWILSQTR 309
            GVALG   L QP +D+G+L       +     FY+V              + W+L + R
Sbjct: 234 QGVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKAR 293