Pairwise Alignments

Query, 307 a.a., Hemolysin-type calcium-binding repeat (2 copies). from Phaeobacter inhibens DSM 17395

Subject, 5839 a.a., putative outer membrane adhesin like proteiin (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (274), Expect = 1e-27
 Identities = 75/217 (34%), Positives = 98/217 (45%), Gaps = 56/217 (25%)

Query: 89   DRFVSLRAEDVARELLSGDDQITALLNDNVTAIRTYAGGDRISLGAGDDTVAAGA----- 143
            D  +   ++D  +  +  DD   A+L D V AI    G DR   GAGDD +   A     
Sbjct: 5532 DDLLPYDSDDNVQTNVDADDLADAILGDQVNAI---PGADRFDGGAGDDVIFGDAIHFTG 5588

Query: 144  ----------------------------------GNDFLTGGLG--ADVLRGGSGADTLH 167
                                               ++F   G    AD++ GG+G D L 
Sbjct: 5589 ISGQGFAAIKAYVADKLGIADASDAQVHRYISEHSDEFDQSGANDKADIILGGAGNDILF 5648

Query: 168  GNGGDDVLRGGVGRDVIFGGVGADLLGGGRGNDRLIGGSGSDTIRGGAGVDRLYGGTGDD 227
            G GG+D L GG G+D ++GG          GND LIGG+G+DT+ GGAG D L GG GDD
Sbjct: 5649 GQGGNDYLDGGAGKDTLYGG---------NGNDTLIGGAGNDTLIGGAGNDTLIGGLGDD 5699

Query: 228  VMTGGDGADIFVFNEGD---HTDRITDFEVGVDRIKL 261
            V+ G  G D FV+   D    TD I DF V  D++ L
Sbjct: 5700 VLRGDSGNDTFVWRYADADKGTDHIMDFNVSEDKLDL 5736



 Score = 59.3 bits (142), Expect = 2e-12
 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 147  FLTGGLGADVLRGG--------SGADTLHGNGGDDVLRGGVGRD-VIFGGVGADLLGGGR 197
            F++ G+  +  R G        +GA     + G D + G  G D ++    G D L G  
Sbjct: 4962 FISSGITTEQFRNGDFTHQPFNTGAKQTDASSGQDTVYGSNGNDHIVSTNGGGDHLLGYA 5021

Query: 198  GNDRLIGGSG--SDTIRGGAGVDRLYGGTGDDVMTGGDGADIFVF--NEGDH 245
            GND L+GG     DTI GG G D L  G G D + GG+G DI V   N  D+
Sbjct: 5022 GNDVLVGGDAIQGDTINGGTGNDILVAGLGQDSLYGGEGNDIAVLMGNRADY 5073



 Score = 43.9 bits (102), Expect = 9e-08
 Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 14/84 (16%)

Query: 105  SGDDQITALLNDNVTAIRTYAGGDRISLGAGDD-----------TVAAGAGNDFLTGGLG 153
            SG D +    N N   + T  GGD +   AG+D           T+  G GND L  GLG
Sbjct: 4993 SGQDTVYGS-NGNDHIVSTNGGGDHLLGYAGNDVLVGGDAIQGDTINGGTGNDILVAGLG 5051

Query: 154  ADVLRGGSGAD--TLHGNGGDDVL 175
             D L GG G D   L GN  D ++
Sbjct: 5052 QDSLYGGEGNDIAVLMGNRADYII 5075