Pairwise Alignments

Query, 315 a.a., dipeptide transport system permease protein DppC from Phaeobacter inhibens DSM 17395

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  209 bits (533), Expect = 5e-59
 Identities = 108/285 (37%), Positives = 170/285 (59%), Gaps = 10/285 (3%)

Query: 27  RRNPVAMVSFAVFLVITIASILAPVLAPFDPYDPAQIDIMNSEYPPVWIDGSDSQFVFGT 86
           R  PV   S  +     + +I AP++AP +PYDP QI    +  PP         ++ GT
Sbjct: 13  RHGPVLTASKLLLASYILVAIAAPLIAPQNPYDPLQIYGWEASSPPGTRGSGGYLYLLGT 72

Query: 87  DDQGRDLWSTILYGTRLSLLIGLCAVALQAFLGISIGLVAGYVGGRLDSLLMRFADIQLS 146
           D  GRD+ STILYG R+SL++ + + AL A +G++ G+ A Y G  +D  +MR  D+QLS
Sbjct: 73  DGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDLQLS 132

Query: 147 FSTLMVAIIFLAVTQAMFGSETFNQYAIYFLIAVIGVAEWPQYARTVRATVLAEKKKEYI 206
             T+++A+I +                I  +I  + +A+W  YAR  R   L+E  K Y+
Sbjct: 133 LPTILIALIAIVTLGP----------GIDRIILALIIAQWATYARIARGVALSEANKPYM 182

Query: 207 DSARVLGFGPMRIMVRHILPNSLSPIFVISTVQVANAIISEASLSFLGLGMPPSQPSLGS 266
           D+AR++     RI+ RH+LPNS++P   +  ++V +A+  EA+LSFLGLG+P  +PSLGS
Sbjct: 183 DAARLMRLPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGS 242

Query: 267 LISSGFDYIFSGSWWITAIPGVVLVVLVLVINLLGDWMRDVLNPK 311
            +++GF Y+ +G +WI+  PG+ L  L+  INL+G+ +R  L+P+
Sbjct: 243 AVANGFQYLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287