Pairwise Alignments

Query, 347 a.a., ABC transporter, integral inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  110 bits (274), Expect = 6e-29
 Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 23/295 (7%)

Query: 45  VIVLCAVLSRMMPGDTLQVMLSTDLARGLGTGEAQQLQETMGLGGGIASQVWAYLSRLLA 104
           +IV+   LSRM  GD   + L  + +  +     +Q +E  GL   I  Q   Y+  ++ 
Sbjct: 19  LIVMVFFLSRMT-GDPAALFLPVEASAEM----KEQFRELHGLNDPILVQFARYVGDVVT 73

Query: 105 GDLGYSIPHAAPVLQLLLTALPWTGLLILGAMPVFLIGGA--LAGIEAGQLPGGSVDRWV 162
           GDLG S+  A P L ++L A  WT  L L  + + L+ GA  + G       GG  DR  
Sbjct: 74  GDLGESLRKARPALDVVLEAFTWT--LWLAVITMTLVTGAAIVVGSLGAFRSGGFFDRLS 131

Query: 163 TPVVTMLASLPPFTGAVLLLLVFGILWPVLPTGGAEPLFPAMDQLGRAVGVLRHAILPML 222
           + V  + AS+P F  A++ +++F I + +LPT G               G + H ILP+ 
Sbjct: 132 SMVSLIGASVPDFWLAIVAIVIFSINFAILPTSG--------------TGSVVHWILPIA 177

Query: 223 ALALHELARFYFLARAETLNLAQRDFIVNAGARGISPWRLRWAYIGRSLIPACLSRLSDT 282
            L +        + R   ++     ++  A A+G+    + + +  R+ +   ++ + D 
Sbjct: 178 VLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVVGDQ 237

Query: 283 LTGLVSAVFFVEIVFSYPGTGYLIYSAILDRDYDLLQGAVVFMAGVVLLMNWLVD 337
              L++    VE +F +PG G L+  +IL RD++++  A++  A  + LMN L+D
Sbjct: 238 AASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLID 292