Pairwise Alignments

Query, 259 a.a., succinate dehydrogenase iron-sulfur subunit from Phaeobacter inhibens DSM 17395

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 22/196 (11%)

Query: 56  GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKVYP 115
           G  +LDAL  I       + FR SC+ G CGSCA+ I+  + LAC     +++ ++ + P
Sbjct: 22  GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLAC---KTKVEDNMIIEP 78

Query: 116 LPHMPVVKDLIPDLTHFYAQHASIMPWLETKTNRPA-------KEWKQSIEDRKKLDGLY 168
           L    V+ DL+ D   +Y +  ++  +++ K  + +       K +   ++D KK+ G  
Sbjct: 79  LEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRG-- 136

Query: 169 ECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATPER--LDELEDPFKLYR 226
            C+ C SC   CP+  ++   Y GP  +    R+  D +DE   E+   DE      +Y 
Sbjct: 137 -CIDCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKDEIDREKEAFDE-----NIYN 188

Query: 227 CHTIMNCAKTCPKGLN 242
           C T   C + CPK ++
Sbjct: 189 CTTCGRCVEVCPKEID 204