Pairwise Alignments

Query, 325 a.a., DNA topoisomerase 1B-like protein from Phaeobacter inhibens DSM 17395

Subject, 372 a.a., DNA topoisomerase I from Azospirillum brasilense Sp245

 Score =  229 bits (584), Expect = 8e-65
 Identities = 120/292 (41%), Positives = 158/292 (54%), Gaps = 8/292 (2%)

Query: 3   LVYYTDDQPGITRRRRGRGFSYYMPDGSHIGDATERARLNGLGVPPAYTDVWLCPLTNGH 62
           L Y  DD+PGI RRR G+GFSY  PDG+ + +     R+  L +PPAY  VW+CP  +GH
Sbjct: 22  LSYVCDDEPGIRRRRAGKGFSYRWPDGTRVTEEDTLERIRKLAIPPAYRGVWICPDPDGH 81

Query: 63  LQATGRDARDRKQYRYHPEWQAHRAEQKFAQLGTFGERLPVLRRWISDRLTGPVGDEDTA 122
           LQATGRD R RKQYRYHP W   R   KF ++  F   LP +RR +   L       +  
Sbjct: 82  LQATGRDTRGRKQYRYHPRWTEMREGTKFGRMLDFCRALPAIRRQVDGDLARRGLPREKV 141

Query: 123 IAAVLALLDRGSLRIGNPSYTEENGSYGATTLRPRHVAFSGQMIQLRYTAKGGQTVEKSL 182
           +AAV+ LL+   +R+GN SY  EN SYG TTLR  H    G  I+  +  K G+    +L
Sbjct: 142 LAAVVRLLETTLIRVGNESYARENSSYGLTTLRDDHADIEGSEIRFTFKGKSGKEWNVAL 201

Query: 183 RGPALQRILERSQDLAGPELISWVDADGNAHAVRSEQVQEVLSKLCGDGVSAKTLRTWNG 242
           +   L R++   +D+ G EL  +VD DG  HAV S  V E L    G   +AK  RTW G
Sbjct: 202 KDRRLARVVSACRDVPGDELFQYVDRDGQRHAVSSGDVNEYLRAATGQDFTAKDFRTWAG 261

Query: 243 SHAAFTVALDAPTL--------TITAMAEAAAERLHNTPTIARNSYIHPQII 286
           +  A     +  T          +T   E  A RL NT ++ R SY+HP+I+
Sbjct: 262 TVLAAMALREFETFDNAAKAKRNVTHAIEQVAARLGNTASVCRKSYVHPEIL 313