Pairwise Alignments

Query, 325 a.a., DNA topoisomerase 1B-like protein from Phaeobacter inhibens DSM 17395

Subject, 443 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  216 bits (550), Expect = 8e-61
 Identities = 128/333 (38%), Positives = 174/333 (52%), Gaps = 18/333 (5%)

Query: 3   LVYYTDDQPGITRRRRGRGFSYYMPDGSHIGDATERARLNGLGVPPAYTDVWLCPLTNGH 62
           L+Y  D QPGI+RR+ G+ FSY   DG  + DA    R+  L +PPAYT+VW+C   NGH
Sbjct: 74  LIYVNDQQPGISRRKAGKNFSYRDADGQRVTDADTLQRIRALAIPPAYTEVWICAKPNGH 133

Query: 63  LQATGRDARDRKQYRYHPEWQAHRAEQKFAQLGTFGERLPVLRRWISDRLTGPVGDEDTA 122
           LQATGRDAR RKQYRYH +W   R E KF ++  FGE LP LRR +   L  P    +  
Sbjct: 134 LQATGRDARRRKQYRYHADWAQVRGEGKFERVIAFGEALPKLRRRLRRDLLLPGFPREKV 193

Query: 123 IAAVLALLDRGSLRIGNPSYTEENGSYGATTLRPRHVAF-SGQMIQLRYTAKGGQTVEKS 181
           +A V+ALL    +R+GN  Y+  N SYG TTLR RH+ F  G   +L++  K GQ  E  
Sbjct: 194 LAIVVALLADTLVRVGNAEYSRSNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQEHEIE 253

Query: 182 LRGPALQRILERSQDLAGPELISWVDADGNAHAVRSEQVQEVLSKLCGDGVSAKTLRTWN 241
           +    L +++   Q L G  L  + D DG    V S +V + L +  G+  +AK  RTW 
Sbjct: 254 VDDKHLVKLIRECQQLPGQSLFQYKDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWG 313

Query: 242 GSHAAFTVALDAPTLTITA----------MAEAAAERLHNTPTIARNSYIHPQIIALAEL 291
           G+ AA       P    ++          +    A+ L NTP++ R +YI P +      
Sbjct: 314 GTLAALQRLARLPVPERSSERALKQVQNDVIREVADALGNTPSVCRKAYIDPCVF----- 368

Query: 292 PDPQRAARLSALPQRQISGLRLGEDRLIDFLNA 324
            +  RA  L  L    + G R  E   + FL+A
Sbjct: 369 -EGWRAGELQTL-ATGVRGERQWEAATLRFLSA 399