Pairwise Alignments

Query, 444 a.a., putative multi antimicrobial extrusion protein from Phaeobacter inhibens DSM 17395

Subject, 452 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  222 bits (565), Expect = 2e-62
 Identities = 134/437 (30%), Positives = 238/437 (54%), Gaps = 8/437 (1%)

Query: 6   LTQGAVWRALAAVSAPMSLGILGVLSVGLADAYFLGQLGEAPLAAVGFIYPVTTAVTSLS 65
           L    + R L  +S P  +GI+ +L   LAD +F+ QLG   LAA+ F +PVT  ++S++
Sbjct: 7   LLSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSIA 66

Query: 66  IGLSAGANAAISQSLGRGDSAIETNRLSVHAIVLGTLVATLVALVFYLGA---GALFSVM 122
           IG+ AG +  + + +G G++     ++ +H  +L T +  L+A +  LG+     LFS++
Sbjct: 67  IGVGAGVSTNLGRLIGSGNAP--QAKVFLHDALLLTFI--LIASLSALGSIFIEPLFSLL 122

Query: 123 GAKDDVLAEAQSYAPFWALSFPFLVGMALLNAVFRAHGDGATSAVIMMVAAALNIALDPV 182
           GA +  L     Y  +W +  P LV + + N   R+ GD  + A+IM +AA +N+ LDP+
Sbjct: 123 GANETSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMTLAAIINLILDPL 182

Query: 183 LIYGLGPVPEMSTAGAALATALARVLTL-IGAFGYALRTGVIRPPEVFTDGIGGSVREVI 241
           LI+G+GP P +   GAA+AT  + ++ L +  +   ++  ++       D +  +  ++ 
Sbjct: 183 LIFGIGPFPRLEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAAFDIDRMRANWSKLA 242

Query: 242 RVGLPAAFSNAINPAGMAMVTAAAATLGDTVVAGLGAAQRVQSVALVPLLALSAGIGPVV 301
            +  PAA  N INP   A++ A  A +  + VA  GA  R++SV L+ ++ALS+ + P +
Sbjct: 243 HIAQPAALMNLINPLANAVIMAMLAHIDHSAVAAFGAGTRLESVLLIVVMALSSSLMPFI 302

Query: 302 GQNWGADQQMRARLAVWQSWQFCIGYGLAMALVLTLFASDIAGLLTSDQGAAATTAQYLR 361
            QN GA Q  RA+ A+  S +F + +   + + L  FA  +A L ++D       + Y+ 
Sbjct: 303 AQNLGAGQPQRAKQALLLSLKFILVFQTLLYIPLAFFAQPLASLFSTDPQVLEWLSFYIL 362

Query: 362 IVSWSFLGYGVLVTANAAMNARSKAVWSMGLSLMRIFAIYVPLAWLGVWIFGYAGILGAA 421
           ++  ++   G+++    A+NA  + + S+ ++L R+  + +PLA LG +I G  G+L A 
Sbjct: 363 VLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYIDGVKGLLLAL 422

Query: 422 VIANLAAVPGAYFTGRR 438
            I NL      Y+  +R
Sbjct: 423 PITNLLMGIACYYLAQR 439