Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 963 a.a., DNA ligase D from Pedobacter sp. GW460-11-11-14-LB5

 Score = 60.1 bits (144), Expect = 4e-13
 Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 44/287 (15%)

Query: 219 FIAEWKWDGIRVQAVNDKGTRRLYSRTGEDIS--GSFPDVIEALNFDGVLDGELLVKRGD 276
           ++ E KWDG R  +  +K   ++YSR     +   S  + +  L  + +LDGE++  + D
Sbjct: 318 WLYEIKWDGYRAISYLEKDGTKIYSRNNLLFTQFSSVEESLSVLKTNAILDGEIVALKND 377

Query: 277 SVAPFGDLQKRLGRKKVGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKTCVCD 336
             A FG LQ     K   +A L  +     ++D+++  G  L    L+ R+  L+  +  
Sbjct: 378 GSADFGALQ---NWKNTQRAKLHYY-----LFDIVWLEGYSLLSLPLSQRRQILEAIIPK 429

Query: 337 LRDPRIDLS---LPLDFETWEDLAKLRADPPNSVIEGVMIKRRDSAYIAGRKRGYWFKWK 393
             +  I LS   L    + ++   +L+       +EG++ KR DS Y +  +   W K K
Sbjct: 430 YHE-SIKLSQAYLTSGIDFFDAAKRLK-------LEGIIAKRADSFYSSDSRSREWLKIK 481

Query: 394 RDPMLVDAVMLYAQRGHGKRSGYYSDFTFGVWN-DDQLVPVGKAYFGFTDAELKEL---- 448
                   +  Y  R  G    Y+S    GV++   +L  +GK   GF  A  KEL    
Sbjct: 482 AKRRQEVVIGGYT-RNEGTEK-YFSALALGVYDVKGKLNYIGKVGTGFNQATQKELMAEF 539

Query: 449 DR-------FVRNNTID---RFGPVRA------VKPELVLEVAFEGL 479
           D+       F     +D   +F P R       +KP+L+ E+ F  L
Sbjct: 540 DKLATKTCPFETTPDVDEPSQFRPQRLGARPTWLKPKLICEIEFAEL 586