Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 529 a.a., ATP-dependent DNA ligase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  335 bits (859), Expect = 2e-96
 Identities = 201/526 (38%), Positives = 297/526 (56%), Gaps = 9/526 (1%)

Query: 1   MQAFAELLEQLAFTPSRNGKIAHLTTAFATIPDPERGYALAAITGDLALRNVTPSLLR-- 58
           M+ FA+L++QL  +   N KIA L + F    D ++ + +A  TG    R +  +LL+  
Sbjct: 1   MKRFAQLIQQLELSNKTNDKIAALVSYFNYADDKDKVWVIALFTGKKPKRPIKSALLKYW 60

Query: 59  GLVAEETDPELFRLSYDFVGDLAETVALIWPHSDTVIDLSL---TDAVHELTNTAKAQLP 115
            +   ET   LF  SY  VGDL+ET+AL+ P ++   D  L    + +H+L         
Sbjct: 61  AIDITETPEWLFAESYANVGDLSETIALLLPPAENTSDFQLHKWVEDLHDLEGKDDDTKK 120

Query: 116 ALIARRLSQMTPTQRYAYLKLATGGLRVGVSARLARSALAQFGDVDVTEIEELWHGLTPP 175
             I    +++   +R+ + KL +G  R+GVS ++  +ALA+   +D  +I     G   P
Sbjct: 121 EFILSAWNKLETQERFIFNKLISGNFRIGVSNKMLVNALAKQSSLDSAQIMHSIMGKWNP 180

Query: 176 YLPLFAWLEGGEKPVNLAAAPFRPVMLSTGTDLEDLASLSPADFIAEWKWDGIRVQAVND 235
           Y   F  L  G       + P+ P  L+   + E       +D+ AEWKWDGIR Q V  
Sbjct: 181 YEITFHELINGIHVNTDNSWPY-PFCLAYALEQEPEKLGEISDWQAEWKWDGIRGQIVKR 239

Query: 236 KGTRRLYSRTGEDISGSFPDV---IEALNFDGVLDGELLVKRGDSVAPFGDLQKRLGRKK 292
            G   ++SR  E ++  FP++   ++ L    VLDGE+L  +   V  F  LQ+RL RK 
Sbjct: 240 NGELFIWSRGEELVTEQFPELHFMLDVLPDGVVLDGEILAVQDKQVLSFSTLQQRLNRKT 299

Query: 293 VGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKTCVCDLRDPRIDLSLPLDFET 352
           + K  L   P    VYD+L +  +D R   L+ R+  L+  +  L +  + +S  ++  +
Sbjct: 300 INKKQLEEAPIGFFVYDILEYEAKDFREEPLSVRRKILEGLLGGLAESAVVISPVINCSS 359

Query: 353 WEDLAKLRADPPNSVIEGVMIKRRDSAYIAGRKRGYWFKWKRDPMLVDAVMLYAQRGHGK 412
           WE+LA LR    +   EG+M+K+  S Y +GRKRG W+KWK +P  VDAVM+YAQ+G G+
Sbjct: 360 WEELAALRQTSRSINSEGIMLKKLTSHYHSGRKRGDWWKWKINPYTVDAVMIYAQKGSGR 419

Query: 413 RSGYYSDFTFGVWNDDQLVPVGKAYFGFTDAELKELDRFVRNNTIDRFGPVRAVKPELVL 472
           R+ +++D+TF V + + LV + KAY G TD E+KE++ FV  N I++FGPVR VKPELV 
Sbjct: 420 RANFFTDYTFAVRDGENLVTIAKAYSGLTDKEIKEVNSFVTRNAIEKFGPVRTVKPELVF 479

Query: 473 EVAFEGLNESSRHKSGLAMRFPRINRIRTDKPALEAGTLAELRAFL 518
           E+AFEG+ ES RHK+GLA+RFPRI R R DK A E  TL +LR  L
Sbjct: 480 EIAFEGIAESKRHKAGLALRFPRILRWRKDKKADEINTLEDLRQLL 525