Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 898 a.a., DNA ligase D from Pedobacter sp. GW460-11-11-14-LB5

 Score = 82.4 bits (202), Expect = 6e-20
 Identities = 89/325 (27%), Positives = 132/325 (40%), Gaps = 54/325 (16%)

Query: 218 DFIAEWKWDGIRVQAVNDKGTRRLYSRTGEDISGSFPDVIEAL---NFDGVLDGELLVKR 274
           D+  E KWDG R  A  +KG   L SR  +  +  F  + + L     + VLDGE+LV  
Sbjct: 263 DWQYEVKWDGYRALAFVNKGKVDLLSRNNKSFNEKFYPIYDLLLGWKMNAVLDGEILVLN 322

Query: 275 GDSVAPFGDLQKRLGRKKVGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKTCV 334
              V+ FG LQ             A       V+D+L+++G++L    L  RQ  L   V
Sbjct: 323 SKGVSNFGSLQNWRSE--------ADGELVFYVFDILWYDGKNLMELPLYQRQAILNE-V 373

Query: 335 CDLRDPRIDL-----SLPLDFETWEDLAKLRADPPNSVIEGVMIKRRDSAYIAGRKRGYW 389
               D R+ L     +  +DF  ++  +++        +EG++ K+ DS Y   R+   W
Sbjct: 374 LPTDDDRVRLGKVFKASGVDF--FDAASRMG-------LEGIIAKKTDSIYATDRRSKEW 424

Query: 390 FKWKRDPMLVDAVMLYAQRGHGKRSGYYSDFTFGVWNDDQLVPVGKAYFGFTDAELKELD 449
            K K        +  + +     +S  +S    GV+   +L  VGK   GF+D   K + 
Sbjct: 425 LKIKVQKRQEVVIAGFTKNADTAKS--FSSLLLGVYEKGKLQYVGKVGTGFSDKLQKTMM 482

Query: 450 RFVRNNTID--------------RFGP------VRAVKPELVLEVAFEGLNESSRHKSGL 489
              +   ID              RF P         +KPELV EVAF  + E        
Sbjct: 483 EQFKPIIIDKSPFESIPDVNKPSRFRPNPPKAQATWLKPELVCEVAFTEVTEDG------ 536

Query: 490 AMRFPRINRIRTDKPALEAGTLAEL 514
             R P    +R DK A E    AE+
Sbjct: 537 VFRHPSFQGMREDKKAKEVVREAEM 561