Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 856 a.a., DNA ligase from Herbaspirillum seropedicae SmR1

 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 102/363 (28%), Positives = 157/363 (43%), Gaps = 43/363 (11%)

Query: 185 GGEKPVNLAAAPFRPVMLSTG-------TDLEDLASLSPA--DFIAEWKWDGIRVQAVND 235
           G + P+  A A  +    STG         L  L   +PA   ++ E K+DG R     D
Sbjct: 189 GDQAPLAKARASAKAAPDSTGPMPAQMQAQLATLVDRAPAGEQWLCELKFDGYRGLCRID 248

Query: 236 KGTRRLYSRTGEDISGSFPDVIEALN----FDGVLDGELLVKRGDSVAPFGDLQK--RLG 289
            G   +Y+R G D S  +P +++AL      +  +DGE++         F  LQ   R  
Sbjct: 249 HGQAAIYTREGLDWSHRWPILVQALARLPVDEAWIDGEVVALDAQGQISFEALQNLARGD 308

Query: 290 RKKVGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKTCVCDLRDPRIDLSLPLD 349
           R++     L     AL  +D+LY NG DLR   L  R+  L+  +    DP     L L 
Sbjct: 309 RQQADGIRL-----ALYAFDLLYLNGHDLRDIPLRQRKALLRELIPG-SDPE---GLLLY 359

Query: 350 FETWE-DLAKLRADPPNSVIEGVMIKRRDSAYIAGRKRGYWFKWKRDPMLVDAVMLYAQR 408
            E  E   A++        +EG+++KR D+ Y  GR+  YW K K +      +  Y + 
Sbjct: 360 SEHIEGHAAEVFRHACQHGMEGIVLKRADAPY-TGRRDRYWLKLKCEHRQEFVIAGYTEP 418

Query: 409 GHGKRSGYYSDFTFGVWND-DQLVPVGKAYFGFTDAELKEL-----------DRFVRNNT 456
             G+RSG +     GV+++ +QL   G+   GF D  L+ L             F    T
Sbjct: 419 A-GQRSG-FGAILVGVYDEHEQLRYAGRVGTGFDDKLLETLLKQFGPLEQDQPAFANPPT 476

Query: 457 IDRFGPVRAVKPELVLEVAFEGLNESS--RHKSGLAMRFPR-INRIRTDKPALEAGTLAE 513
             +   V  ++P LV EV F     +   RH S +A+R  +  ++IR + P   A   A+
Sbjct: 477 GQQRRGVHWLRPALVAEVRFAQWTSAGILRHGSFVALREDKDPHQIRREGPQPLAEAKAD 536

Query: 514 LRA 516
            +A
Sbjct: 537 AKA 539