Pairwise Alignments

Query, 433 a.a., glucose transporter, permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 378 a.a., sugar ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  241 bits (615), Expect = 3e-68
 Identities = 145/408 (35%), Positives = 222/408 (54%), Gaps = 38/408 (9%)

Query: 19  QQLELDVRLLGMIGAFVILCIGFNILTDGRFLTPRNIFNLTIQTVSVAIMATGMVFVIVT 78
           +QL    ++L ++ A  ++ + F+  T+G FLTPRN+ NL  Q     I+A GMV VI++
Sbjct: 5   KQLFTRYKMLALVIAVAVIWLFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIIS 64

Query: 79  RHIDLSVGALLATCSAVMAVVQTDVLPDMFGLGLNHPATWIITVAVGLAIGTLIGAFQGW 138
             IDLSVG+LL     + A++  DV+         +    +  +++    G +IG   G+
Sbjct: 65  GEIDLSVGSLLGLLGGLAAIL--DVV---------YHIPLLANLSLVALCGLMIGLANGY 113

Query: 139 MVGFLTIPAFIVTLGGFLVWRNVAWYLTDGQTIGPLDSTFLVFGGTSGTLGTTLSWVVGI 198
           M  +L IP+FIV LGG L +R +   +T G TI P+  + +  G   G L  ++   +G+
Sbjct: 114 MTAYLRIPSFIVGLGGMLAFRGILLGITGGTTIAPVSPSLVYVG--QGYLPHSVGIGLGV 171

Query: 199 VATLLALAALWNSRRAKQGHGFPVKPAWAEAVIAGSIAASILGFVAILNAYQIPARRLKR 258
           +   L L   W  RR +  HG        + V    I A + GFV  LN+Y         
Sbjct: 172 LLFALTLFLTWKQRRNRALHGLAAHSRVRDGVRVAVIGAVLAGFVTTLNSYD-------- 223

Query: 259 MMEAQGETMPEGLVVGYGLPISVLILIATAVVMTIIARRTRLGRYIFATGGNPDAAELSG 318
                            G+P+ VL+L+    V + +  +T  GR ++A G N +A  LSG
Sbjct: 224 -----------------GIPVPVLLLLVLLGVFSYVTSQTVFGRRVYAVGSNMEATRLSG 266

Query: 319 INTRLLTVKIFALMGFLCALSAVVASARLANHSNDIGTLDELRVIAAAVIGGTALSGGFG 378
           IN + + + IF +MG +CAL+ +V +ARLA  S   G + EL  IAA  IGGT++ GG G
Sbjct: 267 INVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDAIAACFIGGTSMRGGSG 326

Query: 379 TIYGAILGALIMQSLQSGMAMVGVDAPFQNIVVGTVLVAAVWIDILYR 426
           T+YGA+LGAL++ SL +GM+M+ VD+ +Q IV G++LV AVW+D+  R
Sbjct: 327 TVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAVWVDVSTR 374