Pairwise Alignments

Query, 386 a.a., putative amino acid binding protein from Phaeobacter inhibens DSM 17395

Subject, 592 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  145 bits (367), Expect = 2e-39
 Identities = 126/385 (32%), Positives = 177/385 (45%), Gaps = 56/385 (14%)

Query: 31  VRFAQVAALDGPAAALGQGMQLGLEAAFAEANAAGGVHGRNIVLDSMDDSYEPDKSVALV 90
           VR    A   GP  +LG+    G  +  A  NAAGGVHGR + + +MDD Y+PD++V  V
Sbjct: 188 VRLGMSAPFSGPGVSLGREFHRGAASCLARVNAAGGVHGRRVEIVAMDDGYDPDRTVRNV 247

Query: 91  KQVIADNQHIGLIGAVGTPTASATQPIA---TEAGLPFIGPFTGAGFLRDASH-GNILNV 146
            ++I + +   L G VGTPT +   P+     E  +P + PFTGA  L    H G +  +
Sbjct: 248 IRLIEEERVFALFGLVGTPTVTRVLPLLGGHPERTVPLLFPFTGARPLSLPRHEGLVFRL 307

Query: 147 RATYAAETEAWIAHLVDEQNMKSIALLYQDDGFGRVGLAGVTAALEKRGMTLVAEGTYTR 206
           RA+Y AE    +  L D      IA+ YQ D +GR G A +  AL +R + L AE +Y R
Sbjct: 308 RASYDAEFSELVDRLHD-AGCSRIAVFYQADAYGREGWADLRDALARRRLPLAAEASYPR 366

Query: 207 NTTA----VKKALLTIRKAKPDAVVMVGAYKPVAEFIKLSRKL-----------KFNPTF 251
            + +     ++A L I +  PDAVV VG     A FI+  R +           + +P F
Sbjct: 367 GSGSDADFTEQAGL-ILQGMPDAVVCVGTDATCAAFIRDLRDVPAARGAKRQAGQPSPQF 425

Query: 252 ----------VNISFVGSDALAKELGDAGEGV--------IISQVVPFPWDQSLPVVAQY 293
                        SFV S  L   L   G  V        ++++VV  PW  +LP    Y
Sbjct: 426 SGKGGPAIPVAMPSFVDSRQLVDLLVAMGRSVRRDYTHDLVLTEVVS-PWTGNLPAAIDY 484

Query: 294 QAALKAV------------DA--DAEPGFVTLEGYLTGRLAIRALEDAGADLTRDSYLAA 339
           +     +            DA   + PG V+ EGYL  RL +RALE  G   +      A
Sbjct: 485 RRDFAEMADVPDVLDIPGNDAAPPSAPGEVSFEGYLAARLLVRALERMGPHPSPAGLHEA 544

Query: 340 MAGLRDVDFG-GVTMRFGPDDNQGM 363
           + GL   D G G   R+ P + QG+
Sbjct: 545 LVGLDGYDLGVGQPYRYTPTE-QGL 568