Pairwise Alignments

Query, 394 a.a., ribosomal RNA large subunit methyltransferase N from Phaeobacter inhibens DSM 17395

Subject, 361 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  218 bits (556), Expect = 2e-61
 Identities = 129/356 (36%), Positives = 200/356 (56%), Gaps = 27/356 (7%)

Query: 26  LVGLTRDQLRETLIAHGTPEKQAKMRVGQIWQWIYQWGKRDFAEMTNLAKAYRADLDEHF 85
           L+G +  +L++ ++A G P  +AK    Q++QW+Y+    + AE++   KA+R  L +  
Sbjct: 17  LLGRSLPELQDWVVAQGQPSYRAK----QLYQWLYERSIHNLAEISVFPKAWRQSL-QAV 71

Query: 86  EIATPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEGRGTLCISSQVGCTLTCSFCHT 145
            +   ++V + VS  GT KYL+R+  G  +E V IP   R T+C+SSQ+GC + C FC T
Sbjct: 72  PVGRSQIVDRSVSPSGTIKYLLRLHDGEIIEAVGIPSGDRLTVCVSSQLGCAMACDFCAT 131

Query: 146 GTQKLVRNLTAAEIVGQIMMARDDLDEWPVPGAPKDETRLLSNIVLMGMGEPLYNFENVR 205
           G     R+L   EI+ Q++  ++D  +             +SNIV MGMGEPL N + V 
Sbjct: 132 GKGGFRRHLAPHEIIDQVLTVQEDWQQ------------RVSNIVFMGMGEPLLNLDAVL 179

Query: 206 DAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAEE-------IGCLLAVSFHATTDEVR 258
            A++     + I + +R IT+ST G+   I R AE        +   LAVS HA    +R
Sbjct: 180 AAIRCLN--QDIGIGQRGITVSTVGIPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIR 237

Query: 259 DKLVPINKRWNIEALLEALRAYPRLTNSERITFEYVMLNGVNDSDEDAHRLVELIKGIPA 318
           D+L+P ++ + I  LL+  R Y ++T   R+TFEY++L G+ND  E A +L +L++G  +
Sbjct: 238 DRLIPSSRHYPITDLLQECRDYVQITG-RRVTFEYILLAGLNDQPEQAEQLAQLLRGFQS 296

Query: 319 KVNLIPFNEWPGSPYTRSSNNRIHAFANIIYQAGYASPIRTPRGEDILAACGQLKS 374
            VNLIP+N      Y R S  R+ AFA+ + Q   A  +R  +G    AACGQL++
Sbjct: 297 HVNLIPYNPIDEVEYQRPSKARVDAFADALRQQRVAVTVRWSKGLGADAACGQLRA 352