Pairwise Alignments

Query, 394 a.a., ribosomal RNA large subunit methyltransferase N from Phaeobacter inhibens DSM 17395

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  323 bits (827), Expect = 7e-93
 Identities = 177/369 (47%), Positives = 228/369 (61%), Gaps = 15/369 (4%)

Query: 23  KINLVGLTRDQLRETLIAHGTPEKQAKMRVGQIWQWIYQWGKRDFAEMTNLAKAYRADLD 82
           KINL+ L R  +R      G    +   R  Q+ +WIY +G  DF EMTN+ K  R  L 
Sbjct: 5   KINLLDLDRKAMRALFADLG----EKPFRADQLMKWIYHFGVSDFEEMTNINKVLRQKLA 60

Query: 83  EHFEIATPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEGRGTLCISSQVGCTLTCSF 142
              EI  PE+ S Q STDGT K+ + +  G EVE VYIPE+ R TLC+SSQVGC L C+F
Sbjct: 61  ARCEIVAPEISSYQKSTDGTIKFAIHVGEGQEVETVYIPEDDRATLCVSSQVGCALECTF 120

Query: 143 CHTGTQKLVRNLTAAEIVGQIMMARDDLDEWPVPGAPKDETRLLSNIVLMGMGEPLYNFE 202
           C T  Q   RNLT +EIVGQI      L       A +   R ++N+V+MGMGEPL N  
Sbjct: 121 CSTAQQGFNRNLTVSEIVGQIWRVSHFLG-----FAKETGERPITNVVMMGMGEPLLNLA 175

Query: 203 NVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAEEIGCLLAVSFHATTDEVRDKLV 262
           NV  AM I +D  G SLS+RR+TLSTSGVVP + +  + +   LAVS HA  DE+RD LV
Sbjct: 176 NVIPAMDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDALDVALAVSIHAPNDELRDILV 235

Query: 263 PINKRWNIEALLEALRAYPRLTNSE--RITFEYVMLNGVNDSDEDAHRLVELIKGIPAKV 320
           P+NK++ ++  L  +R Y   +N+   R+T EYVML+ +NDS E AH L +L+K  P KV
Sbjct: 236 PVNKKYPLQEFLAGIRRYIAKSNANRGRVTVEYVMLDHINDSTEQAHELAQLMKDTPCKV 295

Query: 321 NLIPFNEWPGSPYTRSSNNRIHAFANIIYQAGYASPIRTPRGEDILAACGQL----KSAT 376
           NLIPFN +PGSPY RSSN+RI  F+ ++ + G    +R  RG+DI AACGQL    +  T
Sbjct: 296 NLIPFNPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRT 355

Query: 377 ERARKSRKQ 385
           +R  K R Q
Sbjct: 356 KRLAKKRMQ 364