Pairwise Alignments

Query, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  259 bits (661), Expect = 5e-74
 Identities = 134/233 (57%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 20  LRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVTIDGQNAT 79
           LRK Y ++ V+++  ++L+ GEVV LLGPNG+GKTT FY I GLV  +AG + +DG++ T
Sbjct: 7   LRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELDGRDLT 66

Query: 80  TLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVKHAHKRRER-LEELLSDFSIE 138
             PMY RA++G+GYLPQE S+FR LSV DNI  VL++        +E+ L  LL +  I 
Sbjct: 67  AEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLLEELQIT 126

Query: 139 HLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGDLKKRGI 198
           H+      +LSGGERRR EIAR LAA P+ +LLDEPFAGVDPISVG+I+ +V  LK+RGI
Sbjct: 127 HVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHLKERGI 186

Query: 199 GVLITDHNVRETLEIVDRAYILHDGKVLMSGTPAEVVDNENVRRVYLGDNFRI 251
           GVLITDHNVRETL I DRAYIL +G VL  G P  +++N +VRRVYLGD FR+
Sbjct: 187 GVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239