Pairwise Alignments

Query, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

Subject, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  286 bits (733), Expect = 2e-82
 Identities = 137/238 (57%), Positives = 191/238 (80%), Gaps = 1/238 (0%)

Query: 15  LRIEKLRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVTID 74
           L+ + L KSY K+ V+ DVS+ ++ G++V LLGPNG+GKTTSFY I GLV  + G++TID
Sbjct: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63

Query: 75  GQNATTLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVKHAHK-RRERLEELLS 133
             + + LPM+ R+RMGIGYLPQE SIFR LSVEDNI +VL    +  H+ R+++LE+LL 
Sbjct: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLEDLLE 123

Query: 134 DFSIEHLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGDL 193
           +F I+H+R++  +ALSGGERRRVEIAR LAA+P+++LLDEPFAGVDPISV DI+ ++  L
Sbjct: 124 EFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIEHL 183

Query: 194 KKRGIGVLITDHNVRETLEIVDRAYILHDGKVLMSGTPAEVVDNENVRRVYLGDNFRI 251
           + RG+GVLITDHNVRETL++ ++AYI+  G+++  GTP +V++NE V++VYLG+ FR+
Sbjct: 184 RDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQFRL 241