Pairwise Alignments

Query, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

Subject, 243 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  273 bits (699), Expect = 2e-78
 Identities = 136/238 (57%), Positives = 178/238 (74%), Gaps = 1/238 (0%)

Query: 15  LRIEKLRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVTID 74
           L+ E L KSY  + V++DVS+++  G++V LLGPNG+GKTT+FY + GLV  + G + ID
Sbjct: 6   LKAENLAKSYKSRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKGRIFID 65

Query: 75  GQNATTLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVK-HAHKRRERLEELLS 133
             + T  PM+ RAR GIGYLPQE SIFR LSV DNI +VL      +   R E LE LL 
Sbjct: 66  DDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRSDLNNDGREEELEHLLE 125

Query: 134 DFSIEHLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGDL 193
           +F I H+R +  +ALSGGERRRVEIAR LAA+PK++LLDEPFAGVDPISV DI+ ++  L
Sbjct: 126 EFHITHIRDSHGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIEQL 185

Query: 194 KKRGIGVLITDHNVRETLEIVDRAYILHDGKVLMSGTPAEVVDNENVRRVYLGDNFRI 251
           K RG+GVLITDHNVRETL++ ++AYI+  G ++  GTPAE++DN+ VR VYLG+ F++
Sbjct: 186 KNRGLGVLITDHNVRETLDVCEKAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQFKL 243