Pairwise Alignments

Query, 465 a.a., sensor histidine kinase RegB from Phaeobacter inhibens DSM 17395

Subject, 984 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 35/252 (13%)

Query: 203 LSREQKLTDLGGVVAAAAHELGTPLATIKLASAELIDELDDRPDLREDAALIREQADRCR 262
           L   ++L  +G + A  AHE+G P+  I   +  L DE +D  ++ E +A I EQ  R  
Sbjct: 748 LVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLRDEREDDGEIVEISAQIIEQTKRVS 807

Query: 263 DILRSM---GRAGKDDLHLRQAPLSTVINEA-AEPHMYRGKT-----ILFEEAPESDGDP 313
            I++S+     AG+    L    L+ V  +A     + R +T      L      ++GDP
Sbjct: 808 RIVQSLMSFAHAGERQHQLYPVSLAQVTQDAIGLLSLNRNRTEVQFINLCHPDHVAEGDP 867

Query: 314 QHPTILRQPEIIHGLRNLVQNAVDFA--RSTVWIDASWNDETITLRISDDGRGYPSHLLG 371
           Q         +   L NL+ NA D +     + I +   ++T+ L + D+G G P  +  
Sbjct: 868 Q--------RLAQVLINLLSNARDASPQGGVIRISSEVAEQTVYLVVEDEGSGIPKDIQD 919

Query: 372 RIGDPFVRRRRSDSDRRQRPEYEGMGLGLFIAKTLLERSGAQLTFANGSDPNQTLTRDPA 431
           R+ +PF   +            EG GLGL +  +++E    Q+   + +DP         
Sbjct: 920 RLFEPFFTTKDPG---------EGTGLGLALVYSIIEEHYGQIDIDSPADPE-------T 963

Query: 432 RRGALVQVSWPR 443
           +RG   +++ PR
Sbjct: 964 QRGTRFRITLPR 975