Pairwise Alignments

Query, 465 a.a., sensor histidine kinase RegB from Phaeobacter inhibens DSM 17395

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 30/233 (12%)

Query: 196 LAATQMALSREQKLTDLGGVVAAAAHELGTPLATIKLASAELI-DELDDR-PDLREDAAL 253
           L  T+  L   +KLT LG + A  AHE+  P A I L + EL+  EL D+  D+ E+  +
Sbjct: 452 LNETRQQLVTNEKLTALGELTAGIAHEINNPTAVI-LGNMELLKSELGDKAEDVEEEIDI 510

Query: 254 IREQADRCRDILRSM---GRAGKDDLHLRQAPLSTVINEAA--EPHMYRGKTILFEEAPE 308
           + EQ  R   I+RS+    R G+ +  L    L+ ++ E A    H  + + ++  +   
Sbjct: 511 VIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEEMAILVRHSIKKQEVVLIQ--- 567

Query: 309 SDGDPQHPTILRQPEIIHGLRNLVQNAVDF--ARSTVWI---DASWNDETITLRI--SDD 361
            D +  +P  + +P+++  L NLV NA      +  +WI   D     E I ++I   D+
Sbjct: 568 -DLNASYPIEVNRPQLLQVLINLVVNAAHAMDGQGRIWIRTYDWVQGGEPIGVKIEVEDE 626

Query: 362 GRGYPSHLLGRIGDPFVRRRRSDSDRRQRPEYEGMGLGLFIAKTLLERSGAQL 414
           G+G P   LGRI DPF   R+           +G GLGL ++  +++R G  +
Sbjct: 627 GKGIPEEQLGRIFDPFYTTRQ-----------DGTGLGLSLSYGIIKRIGGTI 668