Pairwise Alignments

Query, 516 a.a., PAS domain-containing protein from Phaeobacter inhibens DSM 17395

Subject, 801 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 76/327 (23%), Positives = 132/327 (40%), Gaps = 18/327 (5%)

Query: 111 ANAESREALCE--WIDGVTRVQLRSTSSEEHNHSIDQELTTLRSAVHQAPYPVWLQSDDG 168
           ANA    AL +  W+  VT              ++  E   LR+ V   P P+W + D  
Sbjct: 152 ANAGDGHALADLLWMRDVTEETRVGDVQGRRAQALQAERDRLRAVVDALPAPIWTRDDSL 211

Query: 169 AVTWSNLAY----------DDLSQKIRGRNVDFSEPLFTDLDDPMASGKPERISI-PLPE 217
           A+   N A           D L+ +         + +        A+G+P R     + +
Sbjct: 212 AIGDGNTALARALDLGSAGDALTARRELAPGATGQEMRALAARSRAAGRPARARFHAVLD 271

Query: 218 SKKKLWYNISTTETEAGWLCHAV----DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIF 273
            ++KL     T  +E     H V    D+  + + E       +  A+   +L   +AIF
Sbjct: 272 GERKLLEITETPLSEGPLRGHTVGIAQDITPIEEVESRLERETEAHAEVLERLGSAIAIF 331

Query: 274 DRNRQLVLFNPVLIDLTALPANFLSSRPNLLTFFDRLRDQRMMPEPKNYSSWRHQMADLL 333
             + +L   N     L  L +++L+  P+   F +R R+ R +PE  ++ +++       
Sbjct: 332 GGDTRLSFHNAAFASLWGLESDWLNGEPSYGDFLERQRENRRLPEVADFPAYKAGELGYF 391

Query: 334 EAAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLFEDITAEITLTRQFRSELEMGQSIM 393
                 R ++   LP G+       PHP G +   FED+T  + L R +     + +  +
Sbjct: 392 TKLLRPR-EDILHLPDGATLRRVIAPHPLGGLITTFEDVTDSLALERSYNQLTAVQRETI 450

Query: 394 DQMDEAIAVFANDGTMTFSNAAYHDLW 420
           D + EA+AVF  +G +  SN A+  LW
Sbjct: 451 DHLHEAVAVFGANGRLRLSNPAFSQLW 477



 Score = 39.7 bits (91), Expect = 4e-07
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 370 EDITAEITLTRQFRSELEMGQSIMDQMDEAIAVFANDGTMTFSNAAYHDLWQMDPD 425
           +DIT    +  +   E E    +++++  AIA+F  D  ++F NAA+  LW ++ D
Sbjct: 298 QDITPIEEVESRLERETEAHAEVLERLGSAIAIFGGDTRLSFHNAAFASLWGLESD 353