Pairwise Alignments

Query, 351 a.a., putative membrane-bound lytic murein transglycosylase A from Phaeobacter inhibens DSM 17395

Subject, 398 a.a., murein degrading transglycosylase protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  210 bits (534), Expect = 6e-59
 Identities = 137/352 (38%), Positives = 178/352 (50%), Gaps = 40/352 (11%)

Query: 22  PQGGQAETSYTMLSFAQLEGWADDDHEAALGAFLQTCRDLND----------------PD 65
           P G     SY  ++   L GW+ D    AL  F ++C  L                   D
Sbjct: 43  PAGVAGPVSYQRVAIEGLPGWSTDRVADALPVFRRSCERLRAVSPNSMVGPSVWGSRASD 102

Query: 66  WRALCALANEQ---DPKAARGFFQLFFRPVLIED-GAPA-LFTGYFEPELSGARRPSSRY 120
           W+A CA+A      D  AAR FF   F+   +   G P  LFTGY+E  L G+  PS+ Y
Sbjct: 103 WQAACAVAARLPAFDDDAARRFFAERFQAWQVTGAGDPTGLFTGYYEAALDGSLSPSAVY 162

Query: 121 RYPVYRQPPESRKISQWLTR-----------RELLTSGVMEGRGLEIAWVDDPVELFFLQ 169
             P+Y  P + R       R           R  +  G + G    I W  DPV++F L 
Sbjct: 163 STPIYGVPLDLRMEGGKGMRVSGGRSLPYPDRAAIEEGAISGVAPVIMWARDPVDVFMLH 222

Query: 170 IQGSGRIRLPDGSSIRVGYGGANGHEYRSIGTELVRRGIYNIHQVSAAVIKRWVRRNPLA 229
           IQGSG++RLPDG   R+GY   NGH +  IG  +  RG+ +    S   I+ W+R NP  
Sbjct: 223 IQGSGQVRLPDGRIQRIGYAANNGHPFVGIGAIMRDRGLGD--GSSMIAIRAWLRANPAE 280

Query: 230 GEDLLMHNPSYVFFREVSRIPASAGPLGAMNRSVTTLRSLAVDPRFTPLGAPVWLEKDGA 289
           G  L+  NP ++FFR +       GP+GA    +T  RSLAVDP   PLGAPVWL    A
Sbjct: 281 GRALMRENPRFIFFRPIE----GEGPIGAQGLPLTGGRSLAVDPSSVPLGAPVWLATSDA 336

Query: 290 --KPMRRLMIAQDTGSAIKGAQRADVFFGSGDEAGIEAGKLRDPGRMVVLLP 339
             + + RLM+AQDTGSAIKGA R D F+GSG+EA   AG ++  GR  VL+P
Sbjct: 337 HGETVNRLMVAQDTGSAIKGAVRGDFFWGSGEEALYHAGGMKSAGRYWVLVP 388