Pairwise Alignments

Query, 899 a.a., protein translocase subunit SecA from Phaeobacter inhibens DSM 17395

Subject, 908 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella amazonensis SB2B

 Score =  931 bits (2406), Expect = 0.0
 Identities = 487/914 (53%), Positives = 642/914 (70%), Gaps = 27/914 (2%)

Query: 5   GTLAKKVFGTPNDRKIKATRPLIAKINALEPEFEKLSDQDLQDKTAELRKRALDGESLDD 64
           G L  K+FG+ NDR +K    ++ KINALE E+EKLSD++L+ KTAE + R   GESL++
Sbjct: 3   GNLLTKIFGSRNDRTLKQLGKVVVKINALEAEYEKLSDEELKAKTAEFKARLEKGESLNE 62

Query: 65  LLPEAFANVREAARRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALT 124
           L+ EAFA VREA++R   +R FD QLMGG+ L    I+EM+TGEGKTL AT PAYLNALT
Sbjct: 63  LMAEAFATVREASKRVFEMRHFDVQLMGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALT 122

Query: 125 GKGVHIVTVNEYLAKRDSEWMGKVFAQLGMTTGVIWSGQPDAEKMAAYQSDVTYATNNEL 184
           GKGVH++TVN+YLA+RD+E    +F  LGM+ GV  +G   A+K AAY +D+TY TNNE 
Sbjct: 123 GKGVHVITVNDYLARRDAENNRPLFEFLGMSVGVNVAGLSHADKKAAYDADITYGTNNEF 182

Query: 185 GFDYLRDNMKPSLDQVFQKHHNFAIVDEVDSILIDEARTPLIISGPAEDRSELYSTIDKL 244
           GFDYLRDNM  S +   Q+  ++A++DEVDSILIDEARTPLIISG AED SELY  ++KL
Sbjct: 183 GFDYLRDNMAFSPNDRVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYMRVNKL 242

Query: 245 IPLL------------SDDHYELDEKTRGVTFTEDGNEYLEQQLIAHELLEEGASLYDPE 292
           IP L             +  Y +DEK R V  TE G E +EQ L    LL EG SLY   
Sbjct: 243 IPSLIRQEKEDTEEFVGEGDYSIDEKARQVHMTERGQEKVEQLLTEAGLLAEGDSLYSAA 302

Query: 293 STTVVHHVNQALRAHKLFQRDKDYIVRDGEVVLIDEFTGRMMAGRRLSEGLHQAIEAKEE 352
           + +++HHVN ALRAH LF++D DY+V++ EVV++DE TGR M GRR SEGLHQA+EAKE 
Sbjct: 303 NISLLHHVNAALRAHTLFEKDVDYVVQNNEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEG 362

Query: 353 VKIQPENTTLASVTFQNYFRLYGKLSGMTGTAMTEAEEFAEIYGLGVVEVPTNRPIARKD 412
           V+IQ EN TLAS+TFQNYFRLY KL+GMTGTA TEA EF  IYGL  V VPTNRP+ RKD
Sbjct: 363 VRIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKD 422

Query: 413 EDDQVYRTAMEKYQAMINETKKAHENGQPVLLGTTSIEKSELLSQLLQKEGIKHNVLNAR 472
             D VY TA EKYQA+I + K   E GQPVL+GT SIE+SELLS+LL ++ I H VLNA+
Sbjct: 423 MPDLVYLTAREKYQAIIADIKDCRERGQPVLVGTVSIEQSELLSRLLNQDKIPHQVLNAK 482

Query: 473 HHEQEAQIVADAGRLGAVTIATNMAGRGTDIKLGGNVEFKVLEAIAETPDGDHEAIRARI 532
            HE+EA+IVA AGR GAVT+ATNMAGRGTDI LGGN + ++ EA+    + D   IRA  
Sbjct: 483 FHEKEAEIVAQAGRSGAVTVATNMAGRGTDIVLGGNWKSEI-EALENPSEADIARIRADW 541

Query: 533 EEAHVADEEAVKQAGGLFVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRI 592
           E  H     AV +AGGL ++ +ERHESRRIDNQLRGRSGRQGDPG + FYLS+ED+LMRI
Sbjct: 542 EVRH----NAVVEAGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDNLMRI 597

Query: 593 FGSERLDKLLSTLGMKEGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDDVMNDQRK 652
           F SER+  ++  LGM+EGEAI HPWV +++E AQ KVE RNFD+RK +L+FDDV NDQR+
Sbjct: 598 FASERVANMMKKLGMEEGEAIEHPWVTRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQ 657

Query: 653 VIFNQRREIMAAEDLSEIVADMRHEVIDDLLDVHMPAKTYADQWDSEGLQEQVREKLGLD 712
           V++ QR E+M AE + E + +++ +V+D ++  ++P ++  + WD  GL++++ ++ GL 
Sbjct: 658 VVYAQRNELMDAESIEETIKNIQADVVDGVISQYIPPQSVEELWDVPGLEDRLAKEFGLQ 717

Query: 713 VPVVDWA-AEEGVDDEQIRERLVEVSDAKMVEKTEAFGPETMRNIEKQVLLQTIDAKWRE 771
           +PV +W   E+ + +E +RER+V+        K +  G   +R  EK V+LQT+D  W+E
Sbjct: 718 LPVQEWLDKEDDLHEETLRERIVDTWRQAYEAKEQMVGTPVLRQFEKAVMLQTLDGLWKE 777

Query: 772 HLLTLEHLRSVVGFRGYAQRDPLNEYKNESFQLFENMLDTLRETVTQQLAHVRPISEDEQ 831
           HL  ++HLR  +  RGYAQ++P  EYK ESF+LF+ ML+TL+  V   L+ V+  ++ + 
Sbjct: 778 HLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQMLETLKHDVIAILSKVQVQAQSDV 837

Query: 832 RQMMMQMAAQQAELQK------AAAGANTSTALQEAPADGFVEDDPSTWGNPSRNDKCPC 885
            +M  +   ++A +Q+      A + A+ ++ L +  +   V  D    G   RND CPC
Sbjct: 838 DEMEARRREEEARIQREYQHAEAESMASDNSELADMASHVPVVRDGEKVG---RNDPCPC 894

Query: 886 GSGKKFKHCHGSLS 899
           GSGKK+K CHG L+
Sbjct: 895 GSGKKYKQCHGKLT 908