Pairwise Alignments

Query, 899 a.a., protein translocase subunit SecA from Phaeobacter inhibens DSM 17395

Subject, 907 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella loihica PV-4

 Score =  909 bits (2348), Expect = 0.0
 Identities = 472/910 (51%), Positives = 630/910 (69%), Gaps = 20/910 (2%)

Query: 5   GTLAKKVFGTPNDRKIKATRPLIAKINALEPEFEKLSDQDLQDKTAELRKRALDGESLDD 64
           G L  K+FG+ NDR +K    ++ KINALE +FEK SD++L+ KTAE ++R   G++LDD
Sbjct: 3   GKLLTKIFGSRNDRTLKTLGKIVTKINALEADFEKFSDEELKAKTAEFKQRLESGQTLDD 62

Query: 65  LLPEAFANVREAARRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALT 124
           ++PEAFA VREA++R   +R FD QL+GG+ L    I+EM+TGEGKTL AT PAYLNALT
Sbjct: 63  VMPEAFAVVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALT 122

Query: 125 GKGVHIVTVNEYLAKRDSEWMGKVFAQLGMTTGVIWSGQPDAEKMAAYQSDVTYATNNEL 184
           GKGVH++TVN+YLA+RD+E    +F  LGMT GV  +G   AEK  AY SD+TY TNNE 
Sbjct: 123 GKGVHVITVNDYLARRDAENNRPLFEFLGMTVGVNIAGMGQAEKKMAYASDITYGTNNEF 182

Query: 185 GFDYLRDNMKPSLDQVFQKHHNFAIVDEVDSILIDEARTPLIISGPAEDRSELYSTIDKL 244
           GFDYLRDNM  S ++  Q+  ++A++DEVDSILIDEARTPLIISG AED SELY  I+ L
Sbjct: 183 GFDYLRDNMAFSPNERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTL 242

Query: 245 IPLL------------SDDHYELDEKTRGVTFTEDGNEYLEQQLIAHELLEEGASLYDPE 292
           IP L             D  Y +DEK + V  TE G E +E  L    +L EG SLY   
Sbjct: 243 IPHLIRQDKEDTEEEIGDGDYSIDEKAKQVHMTERGQEKVEVLLTERGMLAEGDSLYSAA 302

Query: 293 STTVVHHVNQALRAHKLFQRDKDYIVRDGEVVLIDEFTGRMMAGRRLSEGLHQAIEAKEE 352
           + +++HHVN ALRAH LF++D DYIV+D EV+++DE TGR M GRR SEGLHQA+EAKE 
Sbjct: 303 NISLLHHVNAALRAHTLFEKDVDYIVQDNEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEG 362

Query: 353 VKIQPENTTLASVTFQNYFRLYGKLSGMTGTAMTEAEEFAEIYGLGVVEVPTNRPIARKD 412
           V IQ EN TLAS+TFQN+FR Y KL+GMTGTA TEA EF  IYGL  V +PTNRP+ RKD
Sbjct: 363 VHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFEFQHIYGLDTVVIPTNRPMVRKD 422

Query: 413 EDDQVYRTAMEKYQAMINETKKAHENGQPVLLGTTSIEKSELLSQLLQKEGIKHNVLNAR 472
             D VY TA EKY A+I +     + GQPVL+GT SIE+SELL  +L+K  I H VLNA+
Sbjct: 423 HADLVYLTAEEKYDAIIKDIIDCRDRGQPVLVGTVSIEQSELLHSMLKKAKIPHEVLNAK 482

Query: 473 HHEQEAQIVADAGRLGAVTIATNMAGRGTDIKLGGNVEFKVLEAIAETPDGDHEAIRARI 532
            HE+EA+IVA AGR GAVTIATNMAGRGTDI LGGN   ++ +A+ E P  +    +A+I
Sbjct: 483 FHEREAEIVAQAGRSGAVTIATNMAGRGTDIVLGGNWNMEI-DAL-ENPTAEQ---KAKI 537

Query: 533 EEAHVADEEAVKQAGGLFVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRI 592
           +       + V  AGGL ++ +ERHESRRIDNQLRGRSGRQGD G + FYLS+ED LMRI
Sbjct: 538 KADWQVRHDEVVAAGGLHILGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDSLMRI 597

Query: 593 FGSERLDKLLSTLGMKEGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDDVMNDQRK 652
           F SER+  ++  LGM++GEAI HPWV++++E AQ KVE RNFD+RK +L+FDDV NDQR+
Sbjct: 598 FASERVSSMMKKLGMEKGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQ 657

Query: 653 VIFNQRREIMAAEDLSEIVADMRHEVIDDLLDVHMPAKTYADQWDSEGLQEQVREKLGLD 712
           V++ QR E+M AE + + + +++ +V++ L+D ++P ++  + WD  GL+ ++ ++  L 
Sbjct: 658 VVYAQRNELMDAESIQDTIVNIQADVVNGLIDQYIPPQSVEELWDIAGLETRLEQEYALR 717

Query: 713 VPVVDWA-AEEGVDDEQIRERLVEVSDAKMVEKTEAFGPETMRNIEKQVLLQTIDAKWRE 771
           +PV +W   E+ + +E +RER+VE+       K E  G + +R  EK V+LQT+D  W+E
Sbjct: 718 MPVQEWLDKEDDLHEETLRERIVEIWVKAYKAKEEMVGAQVLRQFEKAVMLQTLDGLWKE 777

Query: 772 HLLTLEHLRSVVGFRGYAQRDPLNEYKNESFQLFENMLDTLRETVTQQLAHVRPISEDEQ 831
           HL  ++HLR  +  RGYAQ++P  EYK ESF+LF+ ML++L+  V   L+ V+  ++ + 
Sbjct: 778 HLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQMLESLKHDVISILSKVQVQAQSDV 837

Query: 832 RQMMMQMAAQQAELQK--AAAGANTSTALQEAPADGFVEDDPSTWGNPSRNDKCPCGSGK 889
            +M  +   ++A++++    A A      +EA A    +          RND CPCGSG+
Sbjct: 838 EEMEERRRQEEAKVRRDYQHAEAEALVGAEEAQALAATQPVVREGEKVGRNDPCPCGSGR 897

Query: 890 KFKHCHGSLS 899
           K+K CHG LS
Sbjct: 898 KYKQCHGKLS 907