Pairwise Alignments

Query, 899 a.a., protein translocase subunit SecA from Phaeobacter inhibens DSM 17395

Subject, 908 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella sp. ANA-3

 Score =  912 bits (2356), Expect = 0.0
 Identities = 479/917 (52%), Positives = 634/917 (69%), Gaps = 33/917 (3%)

Query: 5   GTLAKKVFGTPNDRKIKATRPLIAKINALEPEFEKLSDQDLQDKTAELRKRALDGESLDD 64
           G L  KVFG+ NDR +K  + ++ KINALE ++EKL+D+ L+ KTAE R+R   G SL+ 
Sbjct: 3   GKLLTKVFGSRNDRTLKGLQKVVNKINALEADYEKLTDEQLKAKTAEFRERLAAGASLES 62

Query: 65  LLPEAFANVREAARRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALT 124
           ++ EAFA VREA++R   +R FD QL+GG+ L    I+EM+TGEGKTL AT PAYLNALT
Sbjct: 63  IMAEAFATVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALT 122

Query: 125 GKGVHIVTVNEYLAKRDSEWMGKVFAQLGMTTGVIWSGQPDAEKMAAYQSDVTYATNNEL 184
           GKGVH++TVN+YLA+RD+E    +F  LG+T G+  +G     K  AY +D+TY TNNE 
Sbjct: 123 GKGVHVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLGQQAKKDAYNADITYGTNNEF 182

Query: 185 GFDYLRDNMKPSLDQVFQKHHNFAIVDEVDSILIDEARTPLIISGPAEDRSELYSTIDKL 244
           GFDYLRDNM  S  +  Q+  ++A++DEVDSILIDEARTPLIISG AED SELY  I+ L
Sbjct: 183 GFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTL 242

Query: 245 IPLL------------SDDHYELDEKTRGVTFTEDGNEYLEQQLIAHELLEEGASLYDPE 292
           IP L             +  Y +DEK + V FTE G E +E  LI   +L EG SLY   
Sbjct: 243 IPSLIRQDKEDSEEYVGEGDYSIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYSAA 302

Query: 293 STTVVHHVNQALRAHKLFQRDKDYIVRDGEVVLIDEFTGRMMAGRRLSEGLHQAIEAKEE 352
           + +++HHVN ALRAH LF+RD DYIV+DGEV+++DE TGR M GRR SEGLHQA+EAKE 
Sbjct: 303 NISLLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEG 362

Query: 353 VKIQPENTTLASVTFQNYFRLYGKLSGMTGTAMTEAEEFAEIYGLGVVEVPTNRPIARKD 412
           V+IQ EN TLAS+TFQNYFRLY KL+GMTGTA TEA EF  IYGL  V VPTNRP+ RKD
Sbjct: 363 VRIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKD 422

Query: 413 EDDQVYRTAMEKYQAMINETKKAHENGQPVLLGTTSIEKSELLSQLLQKEGIKHNVLNAR 472
             D VY TA EKYQA+I + K   E GQPVL+GT SIE+SELL++L+ KE I H VLNA+
Sbjct: 423 MADLVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLNAK 482

Query: 473 HHEQEAQIVADAGRLGAVTIATNMAGRGTDIKLGGNVEFKVLEAIAETPDGDHEA-IRAR 531
            HE+EA+IVA AGR GAVTIATNMAGRGTDI LGGN   ++ EA+ E P  + +A I+A 
Sbjct: 483 FHEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNMEI-EAL-ENPTAEQKAKIKAD 540

Query: 532 IEEAHVADEEAVKQAGGLFVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMR 591
            +E H    +AV  AGGL ++ +ERHESRRIDNQLRGR+GRQGD G + FYLS+ED LMR
Sbjct: 541 WQERH----DAVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMR 596

Query: 592 IFGSERLDKLLSTLGMKEGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDDVMNDQR 651
           IF S+R+  ++  LGM+EGEAI HPWV++++E AQ KVE RNFD+RK +L+FDDV NDQR
Sbjct: 597 IFASDRVSGMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQR 656

Query: 652 KVIFNQRREIMAAEDLSEIVADMRHEVIDDLLDVHMPAKTYADQWDSEGLQEQVREKLGL 711
           +V++ QR E+M AE + + + +++ +VI  ++D ++P ++  + WD  GL+++++++  L
Sbjct: 657 QVVYAQRNELMDAESIEDTIKNIQDDVISAVIDQYIPPQSVEELWDVPGLEQRLQQEFML 716

Query: 712 DVPVVDWA-AEEGVDDEQIRERLVEVSDAKMVEKTEAFGPETMRNIEKQVLLQTIDAKWR 770
            +P+ +W   E+ + +E +RER++         K E  G   +R  EK V+LQT+D  W+
Sbjct: 717 KLPIQEWLDKEDDLHEETLRERIITSWSDAYKAKEEMVGAPVLRQFEKAVMLQTLDGLWK 776

Query: 771 EHLLTLEHLRSVVGFRGYAQRDPLNEYKNESFQLFENMLDTLRETVTQQLAHVRPISEDE 830
           EHL  ++HLR  +  RGYAQ++P  EYK ESF+LF+ +L TL+  V   L+ V+  ++ +
Sbjct: 777 EHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLSTLKHDVISVLSKVQVQAQSD 836

Query: 831 QRQMMMQMAAQQAELQKAAAGANTSTALQEAPADGFVEDDPSTWGNP--------SRNDK 882
             +M  +   + A++Q+     +   A  EA   G    D      P         RND 
Sbjct: 837 VEEMEARRREEDAKIQR-----DYQHAAAEALVGGDDGSDEMMAHTPMIRDGDKVGRNDP 891

Query: 883 CPCGSGKKFKHCHGSLS 899
           CPCGSG+K+K CHG LS
Sbjct: 892 CPCGSGRKYKQCHGKLS 908