Pairwise Alignments

Query, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

Subject, 415 a.a., polyamine ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  342 bits (876), Expect = 2e-98
 Identities = 184/416 (44%), Positives = 262/416 (62%), Gaps = 9/416 (2%)

Query: 9   PVLAADGTPLKRSLARALRMQKIRALMLIAPLLLFVLLTFILPIADMLFRSVENKIVSDT 68
           P+       LK+ LA A R+ + +A  LIAPL+LF+LL F++PI  +L++SV N  V   
Sbjct: 6   PLNEGTNRTLKQRLAHAERVNRWKAQALIAPLVLFLLLVFLVPIVALLYKSVSNPEVVGG 65

Query: 69  LPKTVVALKDWDANSGETPDEAIFAALAADLQVAAQEKTHTRVGSRLNYENPGISSLFRK 128
           +P+TV A+  WD      P + +F A + DL  A + ++   +  RLN E  G  SL  K
Sbjct: 66  MPRTVAAIATWDGRG--LPADPVFKAASEDLLEARKNQSLGDLSKRLNMELAGYRSLLTK 123

Query: 129 AGRKVKRWDLAEDGPFREQFIKIDEDWADPEVWRTIQTYSGAYTNGYFLNAADFQKGAEG 188
             R +      E   +++    +DE W DP  W+ ++  + + T  Y L A D +    G
Sbjct: 124 TARALPF--KTEPASYKDALEALDERWGDPAYWQAVRRNTSSITPYYLLAAVDHRIDDLG 181

Query: 189 AELRPE--NERIYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLP 246
            E+ P   ++ IY  +F RT  M L IT  C+VL YP+A++LANLPSR +NLLMILVLLP
Sbjct: 182 -EIAPATPDQAIYLEIFARTFWMGLVITAICLVLAYPLAYLLANLPSRQSNLLMILVLLP 240

Query: 247 FWTSLLVRTSAWKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMI 306
           FWTS+LVR +AW V+LQ  G+IN  L+ +G++  D  L ++ N+ G  ++M HILLPFMI
Sbjct: 241 FWTSILVRVAAWIVLLQSGGLINSALMAMGII--DKPLALVFNRTGVYISMVHILLPFMI 298

Query: 307 LPMYSVMQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPE 366
           LP+YSVM+ I+P+Y+RAA SLG   + +FWRVYFPQ+  G+GAG +LVFILAIGYYITP 
Sbjct: 299 LPIYSVMKGISPTYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPA 358

Query: 367 LVGGTKGVFISNRIAFHISQSLNWGLAAALGSILLVVVLALYWAYDKIVGIDNVKL 422
           L+G      +S  +AF+ + S+NWG+A ALG +LL+  + LY  Y  +VG   ++L
Sbjct: 359 LLGSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATVVLYLIYSWLVGASRLRL 414