Pairwise Alignments

Query, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

Subject, 589 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score =  172 bits (437), Expect = 2e-47
 Identities = 84/223 (37%), Positives = 134/223 (60%), Gaps = 4/223 (1%)

Query: 198 IYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLPFWTSLLVRTSA 257
           +Y  + + T  ++    +  ++ GYP+A+ LA LP R   L ++ V++PFWTS LV+T A
Sbjct: 71  VYFRVLMSTFRIAGLTALLSLLFGYPLAYWLAQLPERQRGLAILAVMVPFWTSYLVKTFA 130

Query: 258 WKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIN 317
           W V+L + GVIN  L   G+    + L +++N+FG +  M H +LP  +L M  VM TI+
Sbjct: 131 WMVILGRAGVINQILSGTGM----SPLPLLHNEFGVMAGMVHAMLPLAVLTMLPVMTTID 186

Query: 318 PSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFIS 377
              ++AA++LGA    AFW VYF  S+PG+ A  +L FI ++G++I P L+GG +   ++
Sbjct: 187 RRLVQAAETLGAPPANAFWLVYFQLSLPGVAAAGLLTFISSLGFFIVPALLGGPQQTMLA 246

Query: 378 NRIAFHISQSLNWGLAAALGSILLVVVLALYWAYDKIVGIDNV 420
             I   I + LNW  A AL + +LV  L   W YD++ G+ ++
Sbjct: 247 QLIITQIQEMLNWAFAGALATFMLVAALVTCWVYDRLFGLSSL 289



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 14/213 (6%)

Query: 199 YGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLPFWTSLLVRTSAW 258
           YG  + R    S  + VS  +  + VA+  A L +  A L  +        +L   +S W
Sbjct: 375 YGLEWFRVYFNS-DLWVSATIRSFAVAFATAILATLVAGLAAL--------ALARSSSRW 425

Query: 259 K----VMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQ 314
           +           ++   ++ +GL    A++ ++    G I+  T + LPF  + + +V++
Sbjct: 426 RGAIFAFFLAPMIVPRIVIAVGLFYLFAQIGLVATDLGLIIGHTVLALPFAFVAISAVVK 485

Query: 315 TINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGV 374
             +    +AA +LGA  +     V  P    G+ A  +  FI +         V G    
Sbjct: 486 GHDWRLDQAAATLGANRFKTLMLVTVPLIRGGLVAAFLFAFITSFDELTVAIFVSGGVKT 545

Query: 375 FISNRIAFHISQSLNWGLAAALGSILLVVVLAL 407
            +  ++   +   LN  L AA+  ++  +V+AL
Sbjct: 546 TLPKQMWDDMILQLNPTL-AAVSVVVFAIVMAL 577