Pairwise Alignments

Query, 294 a.a., putative integral membrane protein from Phaeobacter inhibens DSM 17395

Subject, 300 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 21/300 (7%)

Query: 3   LRALAMGLAFAFMWSSAFTSARIIVADASPLYSLAFRFLISGLIGVAVARYMGQSWRLTR 62
           L  +A   A   +W S +   RI V    PL     RF+++G +     R+ G     T 
Sbjct: 9   LPLIAAFFALYVIWGSTYLVIRIGVEHWPPLLLAGIRFVLAGSLMYGFLRWRGAP-APTW 67

Query: 63  GQLKATVIFGICQNALYLGLNFVAMET-IEASLAAIIASTMPMLVAIALWLVYGERLPRL 121
            Q KA  I G+   +   G   VA  T + + +AA+  +T+P+   +  +  +G R  RL
Sbjct: 68  AQWKAGAIIGVLLLSFGNGAVSVAEHTGVASGVAALAVATVPLFTLLCGYF-WGARNTRL 126

Query: 122 GVVGLLAGVLGVALI------MGTRISAGVDLFGVLLCGIG-VLALTLATLALRGATSGG 174
              G++ G++G+A++        + + A + +F       G VL+  L   A  GA +  
Sbjct: 127 EWAGIVLGLIGIAMLNLGSNLQSSPLGATLLVFAAASWAFGSVLSKHLPLPA--GAMASA 184

Query: 175 NYMMVVGLQMLIGSAVLFVVAPMVETFRLTPSWPLALAFVYTTLVPGLTATFIWVLLLNR 234
             M++ G+ +LIGS         +++      W    A  Y T    + A   ++ LL  
Sbjct: 185 VEMLIGGVVLLIGSVAS---GEHLDSMPPLEGW---FALAYLTCFGSIVAFNAYMYLLKH 238

Query: 235 IGAVRAATFHFLNPVFGVAVASVLLGEQLGLLDIVGVGIVTFGILAVQLARQSAQRTPKP 294
           +    A ++ ++NP   V +  V  GE +G  + V + ++   I AV L      R PKP
Sbjct: 239 VRPAAATSYAYVNPAVAVLLGIVFAGETIGAEESVAMLVI---ISAVVLIGLPQWRKPKP 295