Pairwise Alignments

Query, 294 a.a., putative integral membrane protein from Phaeobacter inhibens DSM 17395

Subject, 315 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N1B4

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 30/288 (10%)

Query: 11  AFAFMWSSAFTSARIIVADASPLYSLAFRFLISG--------LIGVAVARYMGQSWRLTR 62
           A   +W   F + R +    SPL + + RFL++         L  V + R   + W    
Sbjct: 22  AVTMIWGGTFVAGRFLADSLSPLLAASLRFLLASVALLLFLLLAQVPLVRPSPRQWL--- 78

Query: 63  GQLKATVIFGICQNALYLGLNFVAMETIEASLAAIIASTMPMLVAIALWLVYGERLPRLG 122
            QL     FGI     Y    F  +  I AS A++I +  P ++ +A WL++ ERL R  
Sbjct: 79  -QLTLLGFFGIF---FYNLCFFYGLHYINASRASLIVALNPAVIGLASWLLFKERLSRAK 134

Query: 123 VVGLLAGVLGVALIMGTR----ISAGVDLF-GVLLCGIGVLALTLATLALRGATSGGNYM 177
           V G+   + G +L++ +R    ++ G D + G LL    VL   + +L  +G       +
Sbjct: 135 VTGIAICIAGASLVIVSRNPQLLAGGTDAWIGDLLIFGCVLGWGIYSLFSKGLNQTLGPV 194

Query: 178 MVVGLQMLIGSAVLFVVAPMVETFRL-------TPSWPLALAFVYTTLVPGLTATFIWVL 230
             V   +L+G+ +L+V + +     +       T  W   L+ +Y  ++    A   +  
Sbjct: 195 QTVTYSILLGTLMLWVTSAVRGELSVAALAGLGTQQW---LSLLYLGVLGSALAYIGYYD 251

Query: 231 LLNRIGAVRAATFHFLNPVFGVAVASVLLGEQLGLLDIVGVGIVTFGI 278
            + +IGA R+  F  LNP+  V   ++LLGEQL L+  +G G++  GI
Sbjct: 252 GIRKIGATRSGVFIALNPLTAVLFGALLLGEQLTLVMCLGGGLILAGI 299