Pairwise Alignments

Query, 314 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 326 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  103 bits (256), Expect = 7e-27
 Identities = 92/322 (28%), Positives = 141/322 (43%), Gaps = 14/322 (4%)

Query: 1   MPSWKKPHAAPQQIDLLLFDQFSGHCLANTVEPLRAANTLAGRQVYSWRFVTVDGGTAMS 60
           +P+ K P     +I  ++F +F     A  V     AN   G  VY    ++  GG   S
Sbjct: 5   IPARKSPM---HRIGFVVFPRFQLMGFA-AVTAFEMANLALGETVYEIELLSEAGGEVKS 60

Query: 61  SARMEVTAQMPLHKAEGDMLIAMPSYGYLRHTTEATARGLRAAQQRYGVLAGFDTGAWLL 120
           SA   V  +   H A   ++        +   T       R + +    +A   TGA++L
Sbjct: 61  SAGFGVLTKTFDHTAYDTVMFGAGVQ--IEPMTPGLVEFARRSFETARRVAAPCTGAFVL 118

Query: 121 AAAGLLDGYRATIHSSEMEAFADMFPAVQAETHR-FLWDRDRLTSSGAMAAFDGILDMIA 179
           A +GLLDG RAT H +      D FPAV+ E  R F+ D    TS+G  A+ D  L M+ 
Sbjct: 119 AESGLLDGRRATTHWAFARQLQDRFPAVKVEEDRIFIVDGSVWTSAGMTASIDLALAMVE 178

Query: 180 QQHGQALRLDVAALFL-------SESQSGSDRSSPVRSASVARAIRAMEANLETPLPLEE 232
           + +GQ +   VA   +        +SQ  +      +S  + R+I   +ANL   L +EE
Sbjct: 179 KDYGQGVARSVARKLVVYHRRAGGQSQFSALLELEPKSDRIQRSIDYAKANLRRGLSVEE 238

Query: 233 VARHAGRSLRDLARRTRGELGTTPQALYRHLRLKQAKRLVLETDFSVAEIAVRCGYEDPS 292
           +A  AG S R  +R  R E G +P      LR++ A+ ++ +   S+  IA   G+    
Sbjct: 239 LADAAGLSARQFSRAFRAETGQSPAKAVETLRVEAARLMMEQGRHSMDVIAEETGFAIAD 298

Query: 293 ALTRAFRSAFATTPRALRATRR 314
            + RAF       P+ +R   R
Sbjct: 299 RMRRAFLRTLGQPPQTIRRNAR 320