Pairwise Alignments

Query, 421 a.a., diaminopimelate decarboxylase LysA from Phaeobacter inhibens DSM 17395

Subject, 416 a.a., diaminopimelate decarboxylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  414 bits (1064), Expect = e-120
 Identities = 220/412 (53%), Positives = 277/412 (67%), Gaps = 4/412 (0%)

Query: 1   MDHFLYRDGALYAEDVPVAEIAATVGTPFYLYSTATLLRHFNLFDDALKGMDHLVCYAMK 60
           M HF YR+G LYAE VPV E+A+  GTP Y+YS ATL RHF  FD A  G+ HL CY++K
Sbjct: 1   MHHFQYREGQLYAEGVPVHELASRYGTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSVK 60

Query: 61  AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIR 120
           A SN  +L+ LA  GAGMD+VS GE  RA AAGVPG RIV+SGVGK  DEIR AL   I 
Sbjct: 61  ANSNVHLLRLLADMGAGMDIVSGGELHRALAAGVPGQRIVYSGVGKQDDEIRAALEADIL 120

Query: 121 QFNVESEPEMDVINAVALELGVVAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180
            FNVES  E++ INAVA ++G  A I VR+NPDVD KTH  I+TG   NKFG+ + +A  
Sbjct: 121 LFNVESVQELERINAVAGQMGRTARIGVRINPDVDPKTHPYISTGMRNNKFGLDMEQALA 180

Query: 181 VYARAASLPGLKVIGIDVHIGSQLTELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGL 240
            Y  A  LP ++ +GID HIGSQLT LAPF  A  +V +  E+LR  G  I  LDLGGGL
Sbjct: 181 AYLLARDLPNVQPVGIDCHIGSQLTTLAPFLEALDRVLDFHERLRDLGLAITHLDLGGGL 240

Query: 241 GIPYTRSNDTPPLPVEYGAMVQRTLGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDR 300
           GI Y    +TPP P E+G  V   L   G  + +EPGR+IAGNAGI+V +VIY KS   +
Sbjct: 241 GITY--GEETPPHPREFGEAVSERLRGRGLSLILEPGRVIAGNAGILVGRVIYTKSTPSK 298

Query: 301 DFLIIDGAMNDLIRPAMYEAYHDIVPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMPP 360
           +F+I D AMNDL+RP++Y++YH I  V    AG ++   D+VGP+CE+GD  AR R +P 
Sbjct: 299 NFIIADAAMNDLVRPSLYQSYHRIAEV--QPAGRDEITADVVGPICESGDFLARDRILPD 356

Query: 361 LEAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVNGDQFAVIRRRPDFDEMI 412
           ++ G+L+A  SAGAYG  M+S YNSRP   EVLV+G     IR+R    +++
Sbjct: 357 MQQGELLAVFSAGAYGFSMSSNYNSRPRAAEVLVDGATARCIRKRETLADLV 408