Pairwise Alignments

Query, 325 a.a., thiamine-binding periplasmic protein ThiB from Phaeobacter inhibens DSM 17395

Subject, 342 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 81/306 (26%), Positives = 126/306 (41%), Gaps = 34/306 (11%)

Query: 4   LVLAAGLLGATAAYADTPELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAA 63
           L  AA LLG+ A  A   EL +Y+   + +D      +   FE   G  +  +  G+   
Sbjct: 12  LTAAATLLGSVAYAAG--ELNLYSSRHYDTD----ERLYSDFEEATGITVNRI-EGNADE 64

Query: 64  LLARVKLEGARSDADVVLGLDTNLTAAAKATGLFADHAVSADYALPFAWEDATFAPYDWG 123
           L+AR++ EGA S ADV L +DT   A AK  GL      S D  +      A     D  
Sbjct: 65  LIARMEAEGANSPADVFLTVDTVRLARAKDLGLLQ----SVDSPILEGRIPAYLQDDDNQ 120

Query: 124 YFAFVHKAGM---------GAPANFAELAESDLKIVIQDPRSSTPGLGLLMWVKAAH-GD 173
           +F F  +A +           PA + +LA+ + + ++    S+      ++     H G+
Sbjct: 121 WFGFSQRARILFYDKTDVENPPATYQDLAKPEYEGMVCIRSSTNVYTQNIVAALIEHLGE 180

Query: 174 KAPEIW-DGLADNVLTVTKGW-SEAYGLFLEGEADMVLSYT------TSPAYHLIAEEDD 225
           +A   W   +  N     +G  ++       GE D+ +S T      T      ++EED 
Sbjct: 181 EAVTDWAKAVVGNFARAPQGGDTDQLRGIASGECDIAMSNTYYYARATRKGDSTMSEEDL 240

Query: 226 SKAAAVFDE----GHYMQVEVAGKLANSDQPELADQFLAFMVSDAFQSVIPTTNWMYPAV 281
           +    VF      G +M +   G  AN+   + A +FL ++ S   Q      N  YPAV
Sbjct: 241 ANIGWVFPNQNSIGAHMNISGGGVAANAPNRDNAVKFLEYLSSVQAQEYFSAGNDEYPAV 300

Query: 282 TPADGL 287
            P  GL
Sbjct: 301 -PGVGL 305